| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2924 |
|---|
| Symbol | |
|---|
| ID | 6198365 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3334643 |
|---|
| End bp | 3337777 |
|---|
| Gene Length | 3135 bp |
|---|
| Protein Length | 1044 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641706871 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001833981 |
|---|
| Protein GI | 182679835 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0978854 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTT CAGAGCCCTT CATCCGCCGC CCCATCGGCA CGATCCTGCT CTCGATCGGT
TTGTTCCTCG TGGGCCTGCT CGGCTATACG CAATTGCCGG TCGCGAGCCT GCCAAATGTC
GAAATGCCGA CGATCAACAT CAACGCGAGC CGGCCTGGCG CTGATCCCGT CATCATGGCG
GAAAGCGTCG CGGCGCCGAT CGAACGGCGG CTCGGTGAAA TTGCAGGCCT GACCGAATTG
ACGTCGGTCA GCGCGCTCGG ATCAACCAAT ATCGTTGCCC AGTTTGATCT CAGCCGGAAT
ATCGACGGGG CCGCGCGTGA CGTGCAGGCC GCTCTCAACG CAGCCCAAAC CGATCTGCCG
AGTGATCTGC CGAATTTGCC GAGCTTCCGC AAGTTCAATC CAGCGGCGGC ACCAATCCTC
ATCCTGGCCC TCACCTCTGA CACGATCCCA GCCAGCACAA TCTATGATCA GACCGATACG
ATCGTCGCCC AGCGTATCTC GCAGATCGAA GGAGTGTCAC AGGTCGTCGT CACCGGCGCC
GACCAGCCGG CGATCCGCGT CACCATCAAT CCGACCCAGC TCTCGGCCAT GGGCTTGAGC
ACGGAAAATA TCCGTACCGC GATCGTCAAT GCCAATGCTC TGAGCCCGAC CGGCACTTTG
GACGGCAACA CCAAAGCACA GTCGATCGGC ACCAATACAC AATTGCGCAA GCCCGAGGAC
TACGGCAATC TCGTGGTCCA GAATACCAAC GGCAACACGG CCCTGCTCTC GTCCGTGGCG
AAGATCGAGA CCGGCGTCCG CAATACATTG TCAGCCGCCT GGCTCAATGG CAAACCGGCG
GTGATCATGG TCATCACCAA ACAAGCCGAT GCCAATGTCA TCGACACGGT TGACCGCGTC
ATGGCCGCGC TCCCCAATAT TGCGCGCTGG ATTCCCGCCG ATATCAAGAT TTCCGTCCTG
AACGATCGGA CGGTCACGAT CCGGGCGAGC GTCGCGGACA TGCAGATGAC CATGCTGATC
ACGATCGGTC TGGTCATGCT CGTGGTCTTC ATCTTCCTGC GCCGCTGGGA GGCCACCCTC
GCCGCTGGCG TGACCGTGCC GCTGGCACTT TCCGGCACCT GCGCCTTGAT GTGGCTGGCG
CATTTTTCGA TCGACAATCT CTCCCTGATG GCACTGGCCG TCGCGGTTGG TTTCGTCGTC
GACGACGCCA TCGTCATGAT CGAGAATATC GAGCGCAATC TTCACGCCGG CATGAGCCCC
ATGCAGGCGG CACTGACAGG TTCCAAGGAA ATCGGTTTCA CGGTGATTTC GATTTCCATT
TCGCTGATGG CCGCCTTCAT CCCCCTTTTG CTGATGGGCG GCCTCGTCGG CCGTTTCTTC
CGCGAATTCT CGTTGACGCT CGCCTTTACC ATTCTGATCT CGACCGTCGT CTCGCTGACC
TTGACGCCGA TGATCTGTGC CTATCTCCTG CGCCCCCCTC AGGAGCGCAA GCATAATTGG
CTGGACCACG CCTTCGAATC CTTCTTCAGC CGTTTGACTG CCGCTTATGT CGCGAGTCTC
GACAAGGTGC TGCACCATCG CGTTTTGACG CTCGTCGTCA TGGTCGCGAC GATCACCGCC
ACCGTCATGC TTTACATCAA CACACCGAAA GGCTTTTTCC CGCAGGATGA TACGGGCCTG
ATTCAGGGCA CGACCGAAGC CGCGACCGAT ATTTCCTTCC AGGCCATGAG CCGCCTGCAA
CAGCAGGTGG CCGCCGTGAT CCAGGCCGAT CCGGCGATTG CGGCAGTCGC CTCCTCAGTC
GGCGGCTCGG GCGGTCCCGG CAACAATGGC GGCCTCAATA CGGGCCGCCT GTTCTTCAGC
CTGAAACCTT TCGAGGAACG GCGTGGCGTC AATTCAAACC AGATCATCGA CAGGCTGCGC
GGCAATTTGG CCAAGGTCGC CGGCATTTCC ACCTTCCTCA TGCCGGTCCA GGACATACGC
ATGGGCGGCA GGACCGGCAA ATCCACCTAC CAATTCACCC TTTGGGACCC AGATAACGAA
GAGCTCAGCC GATACGTGCC TCAGGTTGTC AAGAAATTGC AGGGGGTCCC GGGTCTCGTC
GACGTTTCGA CCGATCGCGA GCCGAACGGT CTGCAATTGA ATGTCGCGGT GGATCGGCTT
GCCGCCGCAA GGCTCGGAGT CTCGATCCAG AACGTCGATA ATATTTTGAA CAATGCCTTC
GCGCAGCGGC AGATCTCGGT TCTCTACTCG CCCCGCAATC AATATCGCAT CATCCTCGCG
GTGCCGCCGG CGCAGGCCAG TTCCCCCAAT GATCTCGCCT CAATCTATGT CCCAGGCGCG
GGGGGAAGCC AGGTGCCTTT GCTCGCCGTG AGTCGTGTCA GCAAGGGGCT TGCCCCCCTC
GTCACCAATC ATCAAGGGCA ATTCCCGGCG GTGACGGTCA CCTATAATCT TGCGGCAGGC
ACGACCCTGC AAACGGCCAA TGATGCCATT CTTGCGGCAG TGGCCGAACT GCATCTGCCC
GATACAGTGC ATGCGGAATT TGCTGGTGAC GCCAAGGCCT TGGCCGCAAC CGGCAAGGCT
CAAGGGTTGC TTGTCATCGC GGCTTTCGTC GCCGTGTATA TCGTCCTCGG CGTTCTCTAC
GAGAGCCTGG CGCATCCCTT GACCATCATC TCGACCCTGC CATCGGCGGG ACTCGGCGCG
CTGCTCGCCC TGAACTGGAC ACATACGGAA CTTTCGGTGA TCGCCTTCAT CGGCATCATT
CTCCTGATCG GCATCGTCAA GAAGAACGGC ATCATGCTCG TCGATTTCGC GCTCGAGGGC
GAACGCAAAC ATGGGCTCGA TTCAGTCGCC TCGATCCGGG AAGCCTGCGC CGAACGGTTC
CGGCCGATCC TGATGACCAC AATGGCGGCC TTTCTCGGCG CCATTCCTCT CATCATCGCC
TCGGGCCCAG GGTCCGAGAT GCGGCGACCG CTCGGCATCA CCATCGCCGG CGGCCTCATC
GTCTCCCAGC TTCTGACTCT CTATACGACG CCGGTCATCT ATCTCATGCT CGATCAACTG
CATCAGCGTC TCTCGGCAAG ACGCACCAAA GGCCGCGCTC CGCAGGCGGG GACAGGCGAG
ACCGCCCCAG CGTGA
|
|---|
| Protein sequence | MNPSEPFIRR PIGTILLSIG LFLVGLLGYT QLPVASLPNV EMPTININAS RPGADPVIMA
ESVAAPIERR LGEIAGLTEL TSVSALGSTN IVAQFDLSRN IDGAARDVQA ALNAAQTDLP
SDLPNLPSFR KFNPAAAPIL ILALTSDTIP ASTIYDQTDT IVAQRISQIE GVSQVVVTGA
DQPAIRVTIN PTQLSAMGLS TENIRTAIVN ANALSPTGTL DGNTKAQSIG TNTQLRKPED
YGNLVVQNTN GNTALLSSVA KIETGVRNTL SAAWLNGKPA VIMVITKQAD ANVIDTVDRV
MAALPNIARW IPADIKISVL NDRTVTIRAS VADMQMTMLI TIGLVMLVVF IFLRRWEATL
AAGVTVPLAL SGTCALMWLA HFSIDNLSLM ALAVAVGFVV DDAIVMIENI ERNLHAGMSP
MQAALTGSKE IGFTVISISI SLMAAFIPLL LMGGLVGRFF REFSLTLAFT ILISTVVSLT
LTPMICAYLL RPPQERKHNW LDHAFESFFS RLTAAYVASL DKVLHHRVLT LVVMVATITA
TVMLYINTPK GFFPQDDTGL IQGTTEAATD ISFQAMSRLQ QQVAAVIQAD PAIAAVASSV
GGSGGPGNNG GLNTGRLFFS LKPFEERRGV NSNQIIDRLR GNLAKVAGIS TFLMPVQDIR
MGGRTGKSTY QFTLWDPDNE ELSRYVPQVV KKLQGVPGLV DVSTDREPNG LQLNVAVDRL
AAARLGVSIQ NVDNILNNAF AQRQISVLYS PRNQYRIILA VPPAQASSPN DLASIYVPGA
GGSQVPLLAV SRVSKGLAPL VTNHQGQFPA VTVTYNLAAG TTLQTANDAI LAAVAELHLP
DTVHAEFAGD AKALAATGKA QGLLVIAAFV AVYIVLGVLY ESLAHPLTII STLPSAGLGA
LLALNWTHTE LSVIAFIGII LLIGIVKKNG IMLVDFALEG ERKHGLDSVA SIREACAERF
RPILMTTMAA FLGAIPLIIA SGPGSEMRRP LGITIAGGLI VSQLLTLYTT PVIYLMLDQL
HQRLSARRTK GRAPQAGTGE TAPA
|
|---|
| |