| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2923 |
|---|
| Symbol | |
|---|
| ID | 6198364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3331406 |
|---|
| End bp | 3334630 |
|---|
| Gene Length | 3225 bp |
|---|
| Protein Length | 1074 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641706870 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001833980 |
|---|
| Protein GI | 182679834 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0817893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATAT CCGCCCTCTT CATCGAAAGG CCGGTCGCGA CATCTCTCCT CGCCGTAGCA
GCCCTGCTGA CAGGTCTCCT CGGCTATCTC TTTCTTCCCG TATCGGCTTT GCCCCAGGTC
GATTTTCCGA CGATCCAGGT CACCACCCAA TTGCCGGGCG CCGATCCCGA TACAATGGCC
ATGCTGGTGA CCGCGCCGCT CGAGCGTCAG CTCGGCCAGA TTCCCTCACT GCAGCGGATG
AGTTCATCGA GCGGCTTCGG CCTGTCGCAG ATCACCCTGC AATTCGTCCT CGACCGCGAC
ATTGACGGTG CCGCGCAGGA TGTCCAGGCG GCGATCAACG CGGCCAATTC GACCCTGCCG
AAAAACCTGC CCTATCCACC GGTCTATTCC AAGGTCAATC CCGCCGCCAG CGCCATCGTG
ACCCTGGCGT TGACCTCCGA CACGGTGTCG ATCCGTCAGC TCGCCGATCT CGGCGATACG
CTGATCGCGC AAAGGCTCAG CCAATTGACC GGCGTCGGCC ATGTCGGCAT TCAAGGAAAT
ATGCGCCCGG CGATCCGCAT ACAGGCGGAT TTCGCCCGGC TCGCCAATTA TGGTCTCGGC
CTTGAGGATC TGCGCACCGC GATCAGTAAT TCCAATGTCG CTGGCGCCAA GGGTTCGCTC
GATGGGCCGC AGCAATCCTA TACACTCGCC TCGAACGATC AATTGACCTC GGCTGACACC
TATAAGGAAG TCGTCGTCAC CTATCATAAT AATGCGCCGG TTTTCGTCAC CGATGTCGCC
GATGTCGTCG AGGGCCTGGA AAACGACAAG GTCGCCGGCT GGCATCAGGG CAAGCCCGCG
GTGGTCATCG ACGTGCAGCG CCAGCCTGGC GCCAATATCG TCGAGACGGT CGCGAGGGTC
AAAGCCGAGC TCACCCGGCT GCAGCAGATC CTGCCCTCCG GCGTCTCCAT GACGATCGTG
CATGATGGCA CCGAGACGAT CCGCGCTTCG ATCGCCGATG TGCAATTCAC TCTGGTGGTT
TCCATCGTCC TCGTCGTGAT CGTGGTTTTG TTCTTCCTGC GCACCGTCAG GGCGACGATC
GTGGCCGGCG TCGCTCTGCC GTTGTCGCTC ATCGCGACAT TCGCGGTCAT GTGGCTCTCG
GGCTTCAGCC TCGACAATCT TTCGCTGATG GCCCTGACCA TCGGGACCGG CTTCGTCATC
GACGATGCCA TCGTGATGAT CGAGAATATC CACCGCTATA TCGAGGATGG CGAGACGCCC
CTCGCCGCCG CGCTGAAAGG CGCTAAGGAA ATCGGTTTTA CCGTCGTTTC GCTGACCATT
TCCCTCATCG CGGTCTTTAT CCCGCTTCTG TTCATGACCG GCATCGTCGG ACGCATGTTC
CGCGAATTCG CGCTGACCCT GACGGTCGCC GTCGTCGTCT CGGCACTGGT TTCCCTGACC
CTGACACCAA TGATGTGCGG CCACCTCCTG CGCGCCGCGA AGATCGGTGA AACGGGCCAT
GCCGCCTCCG GCCTCACGGG ACGGATCGAC CGCTTCACCG ATTGGGTGCT CGGTGGCTAT
CATAAAAGCC TGCTGGTCGT GCTGCGCCAC CAGACCCTGA TGCTGATCCT CAGCACTGTG
ATCATGGCCG CCACCATCTG GCTCTATATC GTTATCCCGA AAGGCTTCCT GCCCGCCGAG
GATACCGGTC TCATCACGGC TATCGTCGAG GCCTCGCCGA CCGTCTCCTT CGATGAAATG
GGACGCTTGC AATCCAAAAT CGTCGAGACG ATCCGCGCCG ATCCCGATGT CGCCGATGTC
GTCTCCGTCA CCGGCGTCAG CATTCTCAAC GCGACCCCCA ATGCCGGCCA TCTGACCATC
GTCTTGCGCC CCCGCGAGTC GGGTCGCGCC AATGCGGCAG AAATCATCGA CAGGCTGCGC
ACGAAATTTG CGCAAAACTC CGATGCGGTC CTCTATTTCC AGAATGTGCA GGACATCCAG
ATCACCACCC AGGCGAGCCG CGCGCAATAT CAATATACGC TCACCGGCAC CAGTCTGACG
GACGTCATGC AATGGACCGA CAAGCTCGTG CAGAAATTGC GCGAGAGCCC GATCCTGCGC
GAGGTCGGCT CCGAGGCCCA GGAAGGCGGC TTGCAGGTCT TCGTCAATGT CAATCGCGAA
AAGGCAGGAC GCCTCGGCGT GTCGATGCAA AATGTCAATG ACACGCTCTA TGACGCCTTC
GGTCAGAGAC AAGTTTCGAC CATTTACGCC CAGGCCAACC AATATCGCGT GATCATCGAG
GCAAAGCCAC AATATCAGAA CGATCCGCGC GTGCTCGACA GGCTCTATGT TCTGGCTGGC
GCCTCGAATA CGAATACGAA CGCCTCATCG AACGCAACCG GCACAGTCAC GACAGCCTCA
GGCTTTTCCA CCACGAACCA GGTGCCGCTC AGCACCTTTG CCAGCCTCGA GCGGAAGACC
GCGCCTTTGT CGATCAGTCA TATCGCGCAA TTTCCCGCCG TGACGGTCAG CTTCAACCTG
ACGCGTGACG CCTCGCTCAG CGATGCGGTC GCGGTCGTCG AGGCGGCCCG GAGCGCCATC
GGCATGCCGG ATTCGATCAG CGCGACCTAT ACGGGCGATG CCGCCGAATT CCAAAGCTCG
CTCGCGGGCG AGCCCTGGCT CATCCTTGCC GCGGCGGTGA CGATCTATAT CGTCCTCGGC
GTTCTCTATG AGAGCGCGAT CCATCCGATC ACCATCATGT CGACCCTTCC GTCGGCTGGC
GTCGGCGCGC TCGTCGCCAT GATGATCTTC CACATGGATC TGTCGCTGAT CGGGCTGATC
GGCATCATCC TGCTCATGGG TATCGTTAAA AAGAATGCGA TCATGATGAT CGATTTTGCG
CTGGAGGCCG AAAGGGTGGA GGGACTCAGT CCCTATGATT CCATCGTCAA GGCCTCGCTG
CTGCGTTTTC GTCCGATCAT GATGACGACG CTCGCCGCTC TGTTTGGTGC CCTGCCCCTG
GCACTCAGCA CCGGCACCGG TTCTGAACTG CGCAATCCGC TTGGCATTTC AATCATCGGC
GGTTTGTTGT TCAGCCAATT GATCACTATT TATTCGACGC CCGTGATCTA TCTCACCATG
GAACGCATTC GGCTTTTCCT CACGGGGCGG CACAAACAGC AATCGCTTGA CGCAAGCCTG
GTCGCTCCTT TTGAGGCGCC GCAGCACAGC AAGGCCGCAG AGTAG
|
|---|
| Protein sequence | MNISALFIER PVATSLLAVA ALLTGLLGYL FLPVSALPQV DFPTIQVTTQ LPGADPDTMA
MLVTAPLERQ LGQIPSLQRM SSSSGFGLSQ ITLQFVLDRD IDGAAQDVQA AINAANSTLP
KNLPYPPVYS KVNPAASAIV TLALTSDTVS IRQLADLGDT LIAQRLSQLT GVGHVGIQGN
MRPAIRIQAD FARLANYGLG LEDLRTAISN SNVAGAKGSL DGPQQSYTLA SNDQLTSADT
YKEVVVTYHN NAPVFVTDVA DVVEGLENDK VAGWHQGKPA VVIDVQRQPG ANIVETVARV
KAELTRLQQI LPSGVSMTIV HDGTETIRAS IADVQFTLVV SIVLVVIVVL FFLRTVRATI
VAGVALPLSL IATFAVMWLS GFSLDNLSLM ALTIGTGFVI DDAIVMIENI HRYIEDGETP
LAAALKGAKE IGFTVVSLTI SLIAVFIPLL FMTGIVGRMF REFALTLTVA VVVSALVSLT
LTPMMCGHLL RAAKIGETGH AASGLTGRID RFTDWVLGGY HKSLLVVLRH QTLMLILSTV
IMAATIWLYI VIPKGFLPAE DTGLITAIVE ASPTVSFDEM GRLQSKIVET IRADPDVADV
VSVTGVSILN ATPNAGHLTI VLRPRESGRA NAAEIIDRLR TKFAQNSDAV LYFQNVQDIQ
ITTQASRAQY QYTLTGTSLT DVMQWTDKLV QKLRESPILR EVGSEAQEGG LQVFVNVNRE
KAGRLGVSMQ NVNDTLYDAF GQRQVSTIYA QANQYRVIIE AKPQYQNDPR VLDRLYVLAG
ASNTNTNASS NATGTVTTAS GFSTTNQVPL STFASLERKT APLSISHIAQ FPAVTVSFNL
TRDASLSDAV AVVEAARSAI GMPDSISATY TGDAAEFQSS LAGEPWLILA AAVTIYIVLG
VLYESAIHPI TIMSTLPSAG VGALVAMMIF HMDLSLIGLI GIILLMGIVK KNAIMMIDFA
LEAERVEGLS PYDSIVKASL LRFRPIMMTT LAALFGALPL ALSTGTGSEL RNPLGISIIG
GLLFSQLITI YSTPVIYLTM ERIRLFLTGR HKQQSLDASL VAPFEAPQHS KAAE
|
|---|
| |