Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2899 |
Symbol | |
ID | 6200367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 3305889 |
End bp | 3306773 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641706846 |
Product | diguanylate phosphodiesterase |
Protein accession | YP_001833956 |
Protein GI | 182679810 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2200] FOG: EAL domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.515646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.355468 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGATG AAAGCAAACG CATGATCGAT GACAGAACTT TGGCCGAGGA TCTGCGGAAG ACCCTTCAGA CCGGGGGTTT TGTCTTGCAT TATCAGCCAA TTTTTGCCGT CGAGACCGGA GAAATCGTCA GCGTCGAAGC CCTCTTTCGC TGGACCCATC GCGACTATGG CGAGATCGCA CCCGATCGCG CGATTGCCTT GACCGAAGCC TGTGACTTGA TCATTCCCCT GGGGGAATGG GTGCTGCGGC GCGCCTGTGA TGAGGCGCGT CAATGGCCGT TCCTCGATCT CTGCGTCAAT GTTTCGCCCC TCCAATTGCG GCACAAAGGC TTTCTTGCCT CCCTCGACCG CATTGTCGCT GAAACCGGTT TCGATCCCTC GCGTCTGGTT CTCGAGGTCA CGGAAAATCA TCCCCTGCAT TATGATGCAG CGACGCTCCG GCTGCTGGCG CAATTGCGCC AGCGCGGGAT CAGACTGGCG CTCGACGATT TCGGTTCCGG TCACGCCAGC TTTGATACGT TGCGGGATTT TCCTTTCGAC AAGCTCAAGA TTGACCGCTC CTTCATCGCC TCCTCACTGA CCAGCCTCGA GGACCGTTTG ATGCTCCAGG CCATCGTGCG GGCCGGCGTG ACCTGCGGCC TCATTGTGAC GGCCGAAGGG GTTGAGACCA AGGAGCAGAA TGCCCTGCTC CAGCGCCTCG GATGCGATGA ATTACAAGGG TTTCTCTTCT CCCCGGCTGT TCCGCCCGTT GACCTCATGG CGCTCCTCAA CCGTCAAAAG AGCGCGAGCC AGAAACGGAA CCTTTCGGGG ATCGATCCGA TGCATTGGCG CAATTTCAAT TCAGCAGAAA CTCGCCGCCC ACAGCCCGGA TTTCCGCCGG CTTAA
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Protein sequence | MRDESKRMID DRTLAEDLRK TLQTGGFVLH YQPIFAVETG EIVSVEALFR WTHRDYGEIA PDRAIALTEA CDLIIPLGEW VLRRACDEAR QWPFLDLCVN VSPLQLRHKG FLASLDRIVA ETGFDPSRLV LEVTENHPLH YDAATLRLLA QLRQRGIRLA LDDFGSGHAS FDTLRDFPFD KLKIDRSFIA SSLTSLEDRL MLQAIVRAGV TCGLIVTAEG VETKEQNALL QRLGCDELQG FLFSPAVPPV DLMALLNRQK SASQKRNLSG IDPMHWRNFN SAETRRPQPG FPPA
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