| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2891 |
|---|
| Symbol | |
|---|
| ID | 6198252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3297377 |
|---|
| End bp | 3298105 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641706839 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001833949 |
|---|
| Protein GI | 182679803 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.162466 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTGA CTGAAAAAAC AGCCCTAGTG TTCGGCGGAT CGCGCGGCAT CGGAGCCGGG
GCTGCGCTGC GGCTGGCGGA GGATGGATTC GCCGTCGCCT TGACCTATGT TTCCCGCCCG
GACAGTGCGG CCGAGGTGGT CGCGCAAATC GAGGCGAAGG GCGGCGCCGC GCTGGCGATC
GAGGCCGATA GTGCCGACGC CCAGGCCATC TCCTCCGCCG TGGCCAAGGC TGTCGAGGCC
TTCGGGACGA TCGATGTCGT GGTCGTCAAC GCCGGCATCA TGCGGGTCGG CACGATCGAT
GTGTTCAGAA TCGAGGATCT CGACCAGATG CTCGCTGTAA ACATCCGCGG TGTTTTCCTG
GCGATCCAGG CTGCCGTCTC GCACATGCGC GAGGGGGGGC GCATCATCAC GATCGGCAGC
AACACGGCGG TGCGGTCGAG CCACCCCGGA ACGACCGTCT ATGCGATGAC CAAGGCGGCA
GTCGCGACGA TGGTTAAAGG CATTGCGATC GATCTGGCGC CGCGCAGGAT CACCGTGAAC
AACATCCAGC CGGGGCCGAC GGAAACCGAC CTGACCGCTG CGATGATTGG CCGACTGGCG
GAAGCGGCCC CGTTGAAGCG GGTCGGGCAA CCCTCCGAAA TCGCCGCCCT CGTCTCCTAC
CTTGCGGGAG ATGAGGCGGG GTACATGACG GGCTCAAGCC TCACGATCGA TGGCGGCTTC
GCCCTGTGA
|
|---|
| Protein sequence | MSVTEKTALV FGGSRGIGAG AALRLAEDGF AVALTYVSRP DSAAEVVAQI EAKGGAALAI
EADSADAQAI SSAVAKAVEA FGTIDVVVVN AGIMRVGTID VFRIEDLDQM LAVNIRGVFL
AIQAAVSHMR EGGRIITIGS NTAVRSSHPG TTVYAMTKAA VATMVKGIAI DLAPRRITVN
NIQPGPTETD LTAAMIGRLA EAAPLKRVGQ PSEIAALVSY LAGDEAGYMT GSSLTIDGGF
AL
|
|---|
| |