Gene Bind_2877 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2877 
Symbol 
ID6198341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp3284263 
End bp3285570 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content58% 
IMG OID641706824 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_001833935 
Protein GI182679789 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.200442 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGG CATTCTCTAA GGTTGAAGAC GCGCCGCGCA AGACGGGCGC TGCTGGGCAT 
GAGGATTACC CTATGCCGTC GAAAAAGATC TTCGTCGTGG TTCTTCTGCT GGTTGGCGGC
GCTCTGGCCT ATGGCGCCTA TGGCCATTGG CGGCGCAGCG TCGAAGCGGC TGAGACCCAG
GAGAAGACGA TCAATTTCGT GCCGAAGGTC CGGGTCCAGG ACGTCAAGCT GCTTGATGAG
CCAGTCCGAT TGAAATTGCC CGGGCAGACC GTCGCCTTCA ATACGGCGTC TCTTTATGCC
CGCGCCACCG GCTACATTGC CGAACGGCAT GTGGACATCG GCAGCCGCGT CAAAAAAGGT
GATTTGCTCG TACGCATCGC TTCTCCCGAT CTCGATCGGC AGCTTGATCA AGCCGAGGCG
CAATTGAAGC AGGTCGAGGC GGCTCTGGCG CAGGCGCAGG CACAGGTCGA TCAGGCCGAG
GCCAATGTGC GTCTCGCCAA TGTGACGTAT TCCCGTGCGG ACGCTTTGAC CAAGCGCGGT
TATGAAACAT TGCAGACCCG GGACAATCAG CAGGCCAATG TCTCGGTGCA GCAGGCGACA
TTGGAGACCG CACATGCGGG GGTCAAATTG GCTCAAGCCA ATGTGCAGGC GCAAAAGGCG
ACGGTTGATC GATTGCGGAC ACTGACCGCC TTTGAACAGG TGGTGGCCCC ATTCGATGGC
GTCATCACGG CGCGCAACGT CGAGGTTGGG GATCTTGTCA ATGCCGATAA TGGCAATGGC
ACGCCGATGT TCTCCATCAA CCATGACGAC GTTTTGCGCG TGGCGGTCAA TGTTCCGCAG
AGCTCGGCGA TTGGGGTGAC GGAAGGGCTG ACCGCCGAGG TTCAAGTGCC GCAAATGCCG
CAGCGTGTAT TCACCGGCAA GGTGGCGCGC AGTTCGGTGG CGTTGACTGC GTCCTCACGC
ACACTCTCGA CGGAAATCGA TGTCATCAAT AAGGATGGTG CTTTGCGTCC AGGCCTTTTT
GTCGATGTGA CCTTCGCTGT CCCGCGTACC CATCCCAATG TCGTCGTGCC CTCCGAAGCT
CTCATCTTCA ATCAGCATGG TTTGCATGTG GCCGTGCTGG GTCCTGATAA TCGGATTGTT
CTACGCCCTG TGACGATCTA TCGGGATTTT GGGCAAACTG TTGAATTAAA TGATGGTTTG
GAAGGTCACG AGAAAATCGT GTTGAGTCCG CCGGCGATTC TCGCTGATGG GAGCAAGGTG
GATGTCGTGC CGAATGAGAA CGAAAAACAG GCATCTGCCA CTCCGTGA
 
Protein sequence
MSEAFSKVED APRKTGAAGH EDYPMPSKKI FVVVLLLVGG ALAYGAYGHW RRSVEAAETQ 
EKTINFVPKV RVQDVKLLDE PVRLKLPGQT VAFNTASLYA RATGYIAERH VDIGSRVKKG
DLLVRIASPD LDRQLDQAEA QLKQVEAALA QAQAQVDQAE ANVRLANVTY SRADALTKRG
YETLQTRDNQ QANVSVQQAT LETAHAGVKL AQANVQAQKA TVDRLRTLTA FEQVVAPFDG
VITARNVEVG DLVNADNGNG TPMFSINHDD VLRVAVNVPQ SSAIGVTEGL TAEVQVPQMP
QRVFTGKVAR SSVALTASSR TLSTEIDVIN KDGALRPGLF VDVTFAVPRT HPNVVVPSEA
LIFNQHGLHV AVLGPDNRIV LRPVTIYRDF GQTVELNDGL EGHEKIVLSP PAILADGSKV
DVVPNENEKQ ASATP