| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2818 |
|---|
| Symbol | |
|---|
| ID | 6201738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3209430 |
|---|
| End bp | 3210380 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641706765 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001833876 |
|---|
| Protein GI | 182679730 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGACCGGA TCGACCTTTT GCGGATCTTC GTGCGCGTGG TCGAAAGCGC AAGTTTCACC
AAGGCGGCCG AGACGCTTGG CATGCCGCGT TCCTCCGTCT CGACAGCCGT GCACGATCTT
GAAACCAGAG TCGGCGCCCG GCTCTTGCAC CGCACCACCC GTCATGTCGC GCCGACGCAA
GACGGCAATG CCTTCTTCGC GCGCTGCCAA CGCCTGATCG CCGATTATGA AGAGACCGAG
GGCCTGTTCC GGCAATCCTC CCCGCGGCCG CGTGGCAAAC TCAGGATCAA TGTCCCGGGC
CGTTTCGGCC GCTTGATCAT CGCGCCGGCC TTGCCCGGCT TCTTCGCGCT TTATCCCGAG
GTCGAGATCG AATTAGGGGT GACCGACCGT ACGGTGGATC TCGTTCAAGA TGGCGTGGAT
TGCGCGATCC GCGTCGGGCC GCTCATGGAT TCAAGCCTGG TTGCCCGCAA GATTGGCGAT
CTCGTCCTGA TCAATTGCGC GAGTCCGCGC TATCTTGCTG CCCATGGTAC TCCACGGAAT
ATAGAGGAAT TGCGCCGACA TCTCGCCGTC AATTATCTCT CCCCGGCGAG CGGAAGGATC
GACGAATGGG AATGGGTCGA GAACGGCAAG ATCCATTCCC TGCCCTTGCC CAGTCAGGTG
ACAGTCAATA ATGCCGACGC CATGATTGCC TGCTGCCTCG CCGGCCTCGG CCTGATCCAG
ATCCCCGCCT ATGATGTCGC GGTTCATCTC GCCACCGGCG AACTGGTCGA AGTCATGCCG
GACCATTGCG CGCCGCCCCT GCCCATGACG ATCCTCTATC CGCATCGCCA TCATGTATCG
CGACGCCTTC AGGTTTTCAT CGAATGGGTG ACCACCCTCT TGCTTGCACG AATTCCGGCC
GAGGCGGTTT CCCCTCACCA GGAGGAGCAC AATGCTCCTC CCAACCGGTA G
|
|---|
| Protein sequence | MDRIDLLRIF VRVVESASFT KAAETLGMPR SSVSTAVHDL ETRVGARLLH RTTRHVAPTQ
DGNAFFARCQ RLIADYEETE GLFRQSSPRP RGKLRINVPG RFGRLIIAPA LPGFFALYPE
VEIELGVTDR TVDLVQDGVD CAIRVGPLMD SSLVARKIGD LVLINCASPR YLAAHGTPRN
IEELRRHLAV NYLSPASGRI DEWEWVENGK IHSLPLPSQV TVNNADAMIA CCLAGLGLIQ
IPAYDVAVHL ATGELVEVMP DHCAPPLPMT ILYPHRHHVS RRLQVFIEWV TTLLLARIPA
EAVSPHQEEH NAPPNR
|
|---|
| |