| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2802 |
|---|
| Symbol | |
|---|
| ID | 6200419 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3189544 |
|---|
| End bp | 3192816 |
|---|
| Gene Length | 3273 bp |
|---|
| Protein Length | 1090 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641706749 |
|---|
| Product | DNA polymerase III, alpha subunit |
|---|
| Protein accession | YP_001833860 |
|---|
| Protein GI | 182679714 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0587] DNA polymerase III, alpha subunit |
|---|
| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.549156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAGGT CCGCGCGTTA TGCCGAACTT CAGGTGACGT CGCATTTCTC ATTTCTGCGC
GGCGCTTCCT CCTGTGAGGA ATTATTCGCC CAAGCCGCGC TGCTCGGCAT CGAGGCCCTG
GCCGTCGTCG ATCGCCATTC CCTTGCCGGC ATCGTGCGTG CCCATCAAGC CGCCAAGGCA
ACTGGTATCC GCCTGATCAT CGGTTGCCGA CTCGATCTCG CGGACGGCAT GAGCGTCCTG
GTCTATCCGA CCGATCGTGC ATCCTATGCA CGTCTCTGCC GCCTGCTCTC GCTTGGGAAA
CAGCGTGGCG GCAAGGCACA GTGCCATCTC GACTGGCTCG ATCTTGTCGC CCATGGCGAA
GGCCTGTTGA CCATCCTGAT CGCTGAGAAG GCCGACGAGA TCTGCGGGCT CCATCTACGC
CGGCTGCATG ATACCTTCAA GGATCGCGCC TATCTCGCGC TCACCCTGCA CCGCCGCCCG
AATGACCAGC TTCGCCTGCA TCAACTGGCC GTTTTAGCCG CCCGTTTCCG CGTCCCGACC
GTCGTCACCA ATGATATCCT CTTCCATGAA CCGGCGCGGC GTATTCTGCA GGATGTCGTG
ACCTGTATTC GGCACGGCTG CACCATTGAT GAGGCAGGCT TTCGACGGGA GCGCCATGCC
GATCGCTATC TCAAGCCACC GGAGGAAATG CACCGGCTCT TCAGCCTTTA TCCCGAAGCA
CTCGCCCGCA CCCTCGAGAT CACCGACCGT TGTCAGTTCA GCCTTGAGGA ACTGACCTAT
CAATATCCGG AAGAAAAGAC GATGCCGGGC CTCACCGCCC AGGAAGCGCT CACACGATTG
ACCTTAAAGG GTGCGGCAGA CCACTACCCC GAAGGCGTGC CGGACAAGGT GCAGGCTCTG
CTCGATCATG AGTTGGAGCT GATCGCCAAA CTCAACTATG CGCCCTATTT TTTGACAGTG
AATGCCATTG TCCACTTTGC CAAGACCGAA GGCATTCTCT GCCAGGGACG AGGCTCGGCC
GCCAATTCCG CCGTCTGCTA TGTGCTCGGC ATTACCAGTA TCGCCCCTGA TCAACACGAC
CTTTTGTTCG AACGGTTCGT CAGCGAGGAA CGCCGGGAGC CTCCTGATAT CGACGTGGAT
TTCGAACATG AGCGGCGCGA GATAGTTATC CAATGGATCT ATAAGACCTA TGGACGCGAT
CGCGCGGCTT TGTGCGCGAC GGTTATTCGC TATCGCGCCA AGGGTGCGCT TCGCGATGTC
GGCAAAGCCC TCGGCCTGCC GGAAGATCTG CTTACAATGC TGTCAAGCCA GACCTGGGTC
TGGTCGAAAC AGGGTCTCGA TGTCAAATCC GCCAAAGAGC TCAACCTCAA TCTCGATGAC
CCGCGTCTGA GACTGACGCT CGATCTCGCA CGCGAGTTGA TCGGCACGCC GCGCCATCTC
TCGCAGCACC CGGGCGGTTT CGTCCTGACC CATGACAGGC TCGATGAATT GGTGCCGATC
GAACCGGCCG CCATGACGGA CCGGCAGGTC ATAGAATGGG ACAAGGATGA TATTGAAGTC
TTGAAATTCA TGAAGGTCGA TGTGCTCGCC CTCGGCATGC TCTCCTGCAT GAAACGCAGT
TTCAATCTGC TTGCGGAACA TAAAAAACTC GCGCTCGCTC TCACGAGCAT CCCGTCAGAA
GATCCGCATA CATATGCAAT GATCCAGCGT GCCGATACGA TCGGTGTCTT TCAGATCGAG
TCCCGCGCAC AGATGAGCAT GCTGCCGCGC CTGAAGCCCA AAACCTTTTA TGATCTCGTG
ATCGAGGTCG CGATCGTCCG GCCGGGCCCT ATCCAGGGCG ATATGGTGCA TCCCTATCTG
CGTCGGCGCG AAGGCAAGGA AGACCCTGAC CTTCCAAGAG CCGAACTGAA AAATGTCCTC
GAGAAAACCC TTGGCGTTCC TCTGTTTCAA GAACAGGCGA TGCGCATTGC CATTGAATGC
GCGGGCTTCA CACCCGGCGA AGCCGACCAG CTTCGCCGCT CCATGGCGAC GTTCAAACAT
ACAGGCACGA TCAATACCTT CAAGGACAAA CTGGTGAATG GCATGGTCGC CAATGGTTAT
GAGCACGCCT TCGCCGAAAG AATCTTTCAT CAATTGGAGG GGTTCGGCTC CTATGGATTT
CCGGAAAGCC ATGCCGCCTC TTTCGCTCTC CTCGCCTATG CCTCGTCCTG GATCAAATGC
TGGCACCCGG ATGTGTTTTG CGCGGCTCTC TTGAACAGCC AACCCATGGG CTTTTATGCC
CCGGCGCAAA TCGTGCGCGA TGCGCGCAAC CATGGCGTTG AGATTCGTCC GGTTTGTGTC
AACCATTCAC ACTGGGATTG CACTCTCGAA GCGACCGGCG ATGAAAAACG TTTTGCCCTG
CGCTTGGGGA TGCGCATGGT CAAGAGACTC TCCAATCAGG ACGCGGCGAC AATCGTTGCC
GCAAAAGCCG ATCAACCCTT CCTCTCGATT GAGGATCTGT GGCATCGCGC CGGTGTGCCC
GTCTCAGCCC TTGTCGCTCT GGCCGAGGCC GATGCCTTTG CTCCCACGTT CGGCATTGCT
CGTCGCAAGG CTCTCTGGAC CATCAAAGCT CTGCGCGACA ATCCCTTGCC TCTCTTTGCG
GCTGCGTCTG CCCGTGAAGC CGCCTTCGTT TCTGAAATCA GAGAACCCGC CGTGACGCTG
ACGCCTATGG CGGCCGGAGG CGAGGTCGTG GAAGATTATG TCTCTGTCGG GCTGACCTTG
CGCGAACATC CCATCGCCTT TCTGCGCGGC GACTTGGCGC GACGGCGCAT CGCCACTTGC
GCCGAAGTCA TCCATGCCCG CGATCGATGC TGGATCGAGA CCGCCGGACT GGTCCTGGTC
CGGCAGCGCC CTGGAAGCGC CAAGGGCGTG ATCTTCATCA CAATCGAAGA TGAAACCGGC
ATCGCCAATC TCGTCATCTG GCCAAAACTC TATGAGAAGC ACCGTCGCAT CATCCATGGC
GCGCGCATGA TCGCAGCACG CGGTCCCATC CAGCGCGAGG GCGATGTCGT TCATCTTGTC
GTCCGGCATC TCACGGATCT GTCGGGGGAT CTCGCCAGCG TGATCCATCG TGAAGACACA
GCCCCGCCAT CCGCTGGAAG CGCCGGCATC GGCTCTCACA AAAGCCTGGT TCGTCATCCG
GCTGATTCAT CAAAGACGAG GCAACCGCAT GGCCTTCTTG CTCTCGACGA GCGCCCTCAC
CAGATCAGAG TGAAAACGCG CGATTTTCAC TGA
|
|---|
| Protein sequence | MNRSARYAEL QVTSHFSFLR GASSCEELFA QAALLGIEAL AVVDRHSLAG IVRAHQAAKA
TGIRLIIGCR LDLADGMSVL VYPTDRASYA RLCRLLSLGK QRGGKAQCHL DWLDLVAHGE
GLLTILIAEK ADEICGLHLR RLHDTFKDRA YLALTLHRRP NDQLRLHQLA VLAARFRVPT
VVTNDILFHE PARRILQDVV TCIRHGCTID EAGFRRERHA DRYLKPPEEM HRLFSLYPEA
LARTLEITDR CQFSLEELTY QYPEEKTMPG LTAQEALTRL TLKGAADHYP EGVPDKVQAL
LDHELELIAK LNYAPYFLTV NAIVHFAKTE GILCQGRGSA ANSAVCYVLG ITSIAPDQHD
LLFERFVSEE RREPPDIDVD FEHERREIVI QWIYKTYGRD RAALCATVIR YRAKGALRDV
GKALGLPEDL LTMLSSQTWV WSKQGLDVKS AKELNLNLDD PRLRLTLDLA RELIGTPRHL
SQHPGGFVLT HDRLDELVPI EPAAMTDRQV IEWDKDDIEV LKFMKVDVLA LGMLSCMKRS
FNLLAEHKKL ALALTSIPSE DPHTYAMIQR ADTIGVFQIE SRAQMSMLPR LKPKTFYDLV
IEVAIVRPGP IQGDMVHPYL RRREGKEDPD LPRAELKNVL EKTLGVPLFQ EQAMRIAIEC
AGFTPGEADQ LRRSMATFKH TGTINTFKDK LVNGMVANGY EHAFAERIFH QLEGFGSYGF
PESHAASFAL LAYASSWIKC WHPDVFCAAL LNSQPMGFYA PAQIVRDARN HGVEIRPVCV
NHSHWDCTLE ATGDEKRFAL RLGMRMVKRL SNQDAATIVA AKADQPFLSI EDLWHRAGVP
VSALVALAEA DAFAPTFGIA RRKALWTIKA LRDNPLPLFA AASAREAAFV SEIREPAVTL
TPMAAGGEVV EDYVSVGLTL REHPIAFLRG DLARRRIATC AEVIHARDRC WIETAGLVLV
RQRPGSAKGV IFITIEDETG IANLVIWPKL YEKHRRIIHG ARMIAARGPI QREGDVVHLV
VRHLTDLSGD LASVIHREDT APPSAGSAGI GSHKSLVRHP ADSSKTRQPH GLLALDERPH
QIRVKTRDFH
|
|---|
| |