| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2784 |
|---|
| Symbol | |
|---|
| ID | 6201664 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 3172710 |
|---|
| End bp | 3173606 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641706731 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001833843 |
|---|
| Protein GI | 182679697 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.551315 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGAATT TGTTGAGCGA GACGCCTGGT CTGATCGCGT TCGTACGCAC CGTGGAAGCC
GGCTCCTTCA GCGCCGCTGC GCGCGATCTT GGTACGACGC CGTCTGCGGT TTCAAAGAGC
GTGGCGCGCT TGGAGAAAAA GGTCGGAACG CGGCTGTTTC TTCGTTCCAC CCGTGCCTTG
ACGCTCACAC AGGAAGGCCA AATTTTCTTC GACCGCATAG CCCCGCTATT GCGTGACCTC
GATTCGAGCG ACGATGCTAT CGGTTCTCAG AGAATGCTGT CAGGCCGTCT GCGCATCAGC
ATGTCCGGCG AACTGGCCCC TTTGCTGCTG CCTCGCCTTT TTGCCGGCTT CGCGTCGGAT
CATCCCCATC TCATTCTCGA TATCGGTCTG ACCGACCGAT TCGTCGATCT CGTGCGGGAA
GACTATGATG TCGTTCTCCG CGCCGGCGAT AGCGCCGGGA GCGATCTCAT CGTGCGCACT
TTGGCGGATT TGCCAATGGT TATAGTCGCT TCCCCATCGT TTCTGCAAAT CTATGATCTC
CCGACCTCAG CGGAGGAGTT GGCGAACACT CCGTTCGCGC GTTTCAAGAT GAACGGCATA
CCGATGCCCG TACGTCTCGG AAACGGAACC GCCTTCGTTC CCTCCGGTCG GGTCGATTGC
GATTCGGGAG CCGCGCTGAT CGAGGCGGCG CGAAGCGGGC TAGGGGCGGC CTATCTTCTT
CGATGCCTTG TGGCAAACGA CCTGAAGGCC GGTACGCTGG TGGACGTTTC GCCCGGGATC
ACCCTTCCCA AGCTTCCATT CAACGTTCTG CATGCCTTTG GACGCACCGT CCCCATGCGC
GTAAGGTTCT TCTGCGACTT CATCGCAGAT GAGGCCAAGA TCATCGGCGC AATGTAA
|
|---|
| Protein sequence | MPNLLSETPG LIAFVRTVEA GSFSAAARDL GTTPSAVSKS VARLEKKVGT RLFLRSTRAL
TLTQEGQIFF DRIAPLLRDL DSSDDAIGSQ RMLSGRLRIS MSGELAPLLL PRLFAGFASD
HPHLILDIGL TDRFVDLVRE DYDVVLRAGD SAGSDLIVRT LADLPMVIVA SPSFLQIYDL
PTSAEELANT PFARFKMNGI PMPVRLGNGT AFVPSGRVDC DSGAALIEAA RSGLGAAYLL
RCLVANDLKA GTLVDVSPGI TLPKLPFNVL HAFGRTVPMR VRFFCDFIAD EAKIIGAM
|
|---|
| |