| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2689 |
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| Symbol | fliF |
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| ID | 6200788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 3063669 |
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| End bp | 3065312 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641706637 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001833750 |
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| Protein GI | 182679604 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.677442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTTC GAGAACAAAT CGAGCGTCTC TGGGCGAATT TGCTGAAGCT TGGCACGAAG
CGTCTGATCA CGCTTGCGGT CGTCGGCGTT TCTGTTTTCG CAATGACGGG ATTAGCCGGA
TATTTCCTGA GTCGGCCGGC GCTCGAGGTC CTCTATTCTG GCCTGGACAG GCAGGACGTC
AGCCGGATCG CTTCCGCTCT CAAGGAGGCG GATATTCCTT TTGATGTCAA TGCTGACGGC
AATAGCGTGC TGGTTCGCTT CGGGGAAACG GCGAGAGCGC GCATGCTCCT AGCGGAAAAA
GGTCTGCCCA ATAGCCCGAA CGCTGGCAAT GAACTGTTCG ACAAGCTCGG ATCTTTGGGA
CTGACGTCGT TCATGCAGGA AGTGACCCGT GTGCGCGCCC TCGAAGGGGA ATTGGCCCGG
ACGATCCAGC TCATGCATGG CGTGAAAGCG GCGCGCGTTC ATATCGTCAT GCCGGATGAA
GGCTCTTTTC GCCGGACACG TCAACCTCCC TCAGCTTCGG TCGTCGTACG AATGGAGTCG
AACGATGATC CGAGTGCGGC AAAGGCGATT CGTCATCTTG TCGCATCCGC CGTCCCGGGC
ATGACGGTTG AAGAGGTCAC GGTTCTGAAT ACGGAGGGTG TGCTGCTCGC ATCTGGAGCC
GATACAGTCG ATGGCGCTCC CAGCGGCATG ATCATGCTCG AAAAGGCGGT CTCTCGGGAA
ATCATTGATA ATATCAGAAA GACTCTGACG CCTTATTTGG GTCTACGCAA TTTCCAGATC
AGCGTCGCGG CTCGTCTCAA CACCGATAAG CGACAGACGA ATGAAACGAT CTACAATCCC
GATTCGAAGG TCGAACGTTC CATTCACGTC ACAAGGCAGA ATCAGAATTC ACAGAACTCC
ACGGTCCAAT CCCCGACATC GGTCGAACGC AATCTTCCTC AGGAAAATGC ACGGTCCGAT
GATGGCAAGC AATCGACTGA GGAAAGCCAG AAACGGGATG AACTGACCAA TTATGAAATC
TCTTCAAAAG TGGTCAATAC CGTCAGCGGC GGCTATGGAA TCGACAATCT GTCCGTGGCG
GTCCTTGTCA ATCGCGCGAG CTTGATCTCC TCCCTGGGTG AAAAGCCCAC GCCGGACGCG
TTAGCCAAGC AGATGAACGA AATTGAGATG TTGGTCGCAT CAGCGGCGGG TGCTCATAAG
GAGCGAGGAG ACATCGTCAA AATTTCGGCT GTGGACTTTA TCGATCCAAG TCATGAACTC
GAGCCGCAGC CGCCGCCATC CATCGGTGAA ATGTTCCTGC GTCAGTCCAC CAATCTCGTC
AACGCGGCCA CGATCCTCGT TGTGGCGATC CTCCTCATCT GGTTCGGCTT GCGTCCGGCA
ACCAAGGCCA TTCTGGCGAA TACACGAAGC ACCGCGACAG CGATCGATCT GAGAGATGAG
GAAGAATTCC AAGCCTTGGA GGATGATGAC GCACCGCCGG CCTTGCCTGT CTGGTCGCCG
CCTTCTGAAC CCAATCTTAT CGAGGATTTG ACCAGTACGC CAAGACACAC ACCTCAGAAG
CGGCTCGAAC AGATCGTCGA GTATGACGAG CAGCAAGCGG CCGCTGTCTT AAAGCAGTGG
ATTCACCAAG GGGAAGAAGT ATGA
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| Protein sequence | MTVREQIERL WANLLKLGTK RLITLAVVGV SVFAMTGLAG YFLSRPALEV LYSGLDRQDV
SRIASALKEA DIPFDVNADG NSVLVRFGET ARARMLLAEK GLPNSPNAGN ELFDKLGSLG
LTSFMQEVTR VRALEGELAR TIQLMHGVKA ARVHIVMPDE GSFRRTRQPP SASVVVRMES
NDDPSAAKAI RHLVASAVPG MTVEEVTVLN TEGVLLASGA DTVDGAPSGM IMLEKAVSRE
IIDNIRKTLT PYLGLRNFQI SVAARLNTDK RQTNETIYNP DSKVERSIHV TRQNQNSQNS
TVQSPTSVER NLPQENARSD DGKQSTEESQ KRDELTNYEI SSKVVNTVSG GYGIDNLSVA
VLVNRASLIS SLGEKPTPDA LAKQMNEIEM LVASAAGAHK ERGDIVKISA VDFIDPSHEL
EPQPPPSIGE MFLRQSTNLV NAATILVVAI LLIWFGLRPA TKAILANTRS TATAIDLRDE
EEFQALEDDD APPALPVWSP PSEPNLIEDL TSTPRHTPQK RLEQIVEYDE QQAAAVLKQW
IHQGEEV
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