| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2684 |
|---|
| Symbol | |
|---|
| ID | 6199840 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 3058305 |
|---|
| End bp | 3058838 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641706632 |
|---|
| Product | lytic transglycosylase catalytic |
|---|
| Protein accession | YP_001833745 |
|---|
| Protein GI | 182679599 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.173573 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCTTTA CCTCTAACGA AATCGTAAAA GCGGAAATTG TATCAACGCA TCTTTGCGAA
AAGGAAATGT CTTGGGCGTC GCATAAATAT AATGTTCCTT TGCCGGTGCT TTATGCCGTT
GGGCTTACGG AAACGGGGCG GAAAGGTTCA TTGCAACCTT ACGCCTTGAA CATAGAAGGA
CCGTCGTATT TTGCCGCGAC CTTGCAGGAA GCGCTCACGC GTTTTTCGAC AGCCCGAAGG
ACAGGCGCGA AATTGATTGA TATCGGTTGC ATGCAGATTA ATTATTATTT CCACGGACGC
AATTTTTCGA GTGTGGAGGC GATGTTCGAT CCCCATCAAA ATGTCGATTA TGCTGCGCGT
TTCTTGCGCG ATCTTAAAGC TAGGGAAGGA AGCTGGACAT TAGCCGCTGC GCGGTATCAT
GCAGGACCAG ATAATAATGC GGCTCAGAAA CGCTATGTGT GTAGCGTGAT CACGAATATG
GTTGCAACGG GTTTTGGAGC CTGGACAATG AATGCCAGGA ACTTCTGTCA TTGA
|
|---|
| Protein sequence | MVFTSNEIVK AEIVSTHLCE KEMSWASHKY NVPLPVLYAV GLTETGRKGS LQPYALNIEG
PSYFAATLQE ALTRFSTARR TGAKLIDIGC MQINYYFHGR NFSSVEAMFD PHQNVDYAAR
FLRDLKAREG SWTLAAARYH AGPDNNAAQK RYVCSVITNM VATGFGAWTM NARNFCH
|
|---|
| |