Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2643 |
Symbol | |
ID | 6200759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 3007211 |
End bp | 3009523 |
Gene Length | 2313 bp |
Protein Length | 770 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641706599 |
Product | endo-1,4-beta-xylanase |
Protein accession | YP_001833713 |
Protein GI | 182679567 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase [COG3693] Beta-1,4-xylanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.739332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTTT TATTATTTAC AAGTGAATTT TATCCTTTAC GCGGTGGAAT CGGGACATAT GCAGCCGAAC TCGCCCGCGG TGCTACGGAG CTTGGTGGTG ACGTAACGTT ATACGCACCG TCCTATCACC AAGACTTAGC TGATGATGAC TTAAAATGCT TTCCTTTCCG TGTTATCCGC TATGCCGGGC ATCGGCATAC GATGAAGAAT CTTCCGCAAA AATTGCAGAT TGTGCGCCGT GCAGTTCGAT CCGAGACATT TGATATTATT CATGCCATGG ATTGGCCCTT CTTCCTGCCA GTCCACCTCA TGGCTCCATC AAAAGTGCAC AAACTGTTCA CAGTACATGG TAGTGATGTC AATGAAATGC GGGCGCCGGT TAAAGCAACT ATCATATCGT TAGTTCGACT ATTCTCGGGT AAATCGGAAA TTTTAGCAAA TAGTAACTTT ACTCGTTCTC TCTTCAACCA ACATTTCCCC GACATACCAC CCCATAAAGT AAAAACGGAG TGGCTTGGAG TATCGGATTT CTGGTTTCAA CCAGCTGCTA ATCGTAGCGA AACGAGATTC AAACTCGGTG TTGCAGATGA TGCTTATGTC ATTCTCACGG TAGGACGCCT CACGCCCAGA AAAGGCCATC TCTCTGTAAT TGAAGCTCTA TCACGTCTTC CAGAGCGTAT TAAGGAACAC ACGATTTATA TAATCGTCGG ACCTCACTAT GATGGTGAGT ACACCAGTAA GGTGAAGGTT GCTGCTGCGG CGTCTGGATG CAAAACATTG TTTTTAAATG AACTATCAGA CGACGTCTTG CGTGATCTTT ACAAGGCGTG CGATGTGTTT TGCCTCACTG GACACACAAA GCTAAACGGT CTTGTCGAAG GTTTCGGACT TGTCTATTTG GAAGCTGGCG CACAAGGGTT ACCGTCGATC GCTGGTAACG TTGGCGGTAT GCCGGAAGCT GTTGAGCACG GAAAATCTGG ATTGGTCGTC AATAGCAACG ATGCAGACTC TATCGCGCAA TCATTGTGTG AACTCCATGA TCTTCCGAGA TTCCGCCAAG CATTGGCAGA TGGAGCGCTT GAACGAGCGA AGATTTTGAC TTGGCGCCGT TGTGTTGCAG CTTCGTATGG TTTTTCATCC CATCATGCAA AGTGGCTCCA ACCACATTCT AGTCCAATTT CTCTTACATC AGATATCACC CAACCGCAGA ATGGGCTTGC GCGCCGTAGT GTGCTTGGAG CCTTCGCGTC AGTTGGACTT CTTAAAACGA AAATATTAGC GGCAACGCCC ACAACGATCC TTCCTTTGAA GCAGGCTGCC GCACGCGTAG GTCTTTTATT CGGATGTGCT TTCGATAAGA TAGCGATTTC TGATGCAGCC TATGGAGCGC TCATCAAGAC TCACGCTGCA ATCCTTACAA CCGATTACCA TATGAAATTT AAGGCACTTC GTCGTAATGG ACCAGAAGCG GATTTCACGA TCGCAGATAG TTTAATTACG TTTGCGGATG CGGCAAGTAT CCCTATTCGT GGCCATAATC TGATTTGGAA CGAGGGAAAT CCAGATTGGT TAATCAAACT TCCTGCAAAT GAACGCATTG AGTGGTTAGA ACGCCATATC AAGGAGGTGA TGGGGCGTTA TCGTGGCCGC ATACATTCTT GGGATGTAGT CAATGAGCCT TTTTGGCCTG GCCATAAAAA GCCAGGCGGC TTTCGGGATG GCCCTTGGTA TTCCGCACTT GGACCAGAAT ATATCATCAA GGCTTTTCAA ATAGCTCGAC GCACCGATCC GTCAGCTAAG CTCGTCTTAA ATGAAGCTTG GGTGGAACGG TCTGATGATC TCGGCTTAGT TGTTCGCGAG GAGTTGTTTA AGCTTCTCCA GGATCTTTCG GTGCGAGGTC TTATTGATGC AGTTGGTCTT GAGTGTCATA TCCGCCCCCA TTATACGCGA AATTTCGATA TCCTTGCACA ATTCATCGCA AAGGTGAGTA CGCTTGGAAT TGATGTCTAT ATCACCGAAC TCGATGTTGA TGATTCTATT TTCTCTGGCT CGATGTCTGA GATCGACGAT AAGGTCGCCG AAATCTATGG GGATTTCGTC CGTGCTATCA CAAAAGCTCC AGCCGTGAAA ATCTTAGAGA CTTGGCAATT GGCTGATCGC TATAGCTTTT ATCAAGATCA GCGTAAGGGA ACAGCGCGTC CTTTACCATT TGACACTTCA CTTGCACCTA AGCCAGCATA CCATACAATT ATTAGCGCTC TTATAGACGC CGGCTCTCAA CCTGTTGGAG TAGTCAGGAC ACCCCAACAC TAG
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Protein sequence | MRLLLFTSEF YPLRGGIGTY AAELARGATE LGGDVTLYAP SYHQDLADDD LKCFPFRVIR YAGHRHTMKN LPQKLQIVRR AVRSETFDII HAMDWPFFLP VHLMAPSKVH KLFTVHGSDV NEMRAPVKAT IISLVRLFSG KSEILANSNF TRSLFNQHFP DIPPHKVKTE WLGVSDFWFQ PAANRSETRF KLGVADDAYV ILTVGRLTPR KGHLSVIEAL SRLPERIKEH TIYIIVGPHY DGEYTSKVKV AAAASGCKTL FLNELSDDVL RDLYKACDVF CLTGHTKLNG LVEGFGLVYL EAGAQGLPSI AGNVGGMPEA VEHGKSGLVV NSNDADSIAQ SLCELHDLPR FRQALADGAL ERAKILTWRR CVAASYGFSS HHAKWLQPHS SPISLTSDIT QPQNGLARRS VLGAFASVGL LKTKILAATP TTILPLKQAA ARVGLLFGCA FDKIAISDAA YGALIKTHAA ILTTDYHMKF KALRRNGPEA DFTIADSLIT FADAASIPIR GHNLIWNEGN PDWLIKLPAN ERIEWLERHI KEVMGRYRGR IHSWDVVNEP FWPGHKKPGG FRDGPWYSAL GPEYIIKAFQ IARRTDPSAK LVLNEAWVER SDDLGLVVRE ELFKLLQDLS VRGLIDAVGL ECHIRPHYTR NFDILAQFIA KVSTLGIDVY ITELDVDDSI FSGSMSEIDD KVAEIYGDFV RAITKAPAVK ILETWQLADR YSFYQDQRKG TARPLPFDTS LAPKPAYHTI ISALIDAGSQ PVGVVRTPQH
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