| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2562 |
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| Symbol | |
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| ID | 6198789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 2927547 |
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| End bp | 2928662 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641706539 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001833653 |
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| Protein GI | 182679507 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.032186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA CACGTCTCCT TTTAGGTCTT GGTTCCGGCG CCGTCATTCT GGCCGCGGCT
GGCGCGGCGA CCTTCTCCTT TGCCTCAGGG TCAGCGCATC CGTCCGTTGA CAACGATCCC
CGAACGGCAT CACCACTCGT CAAAGTCACC GAAACCGTGC ATGCCGGCCT CTCCCAACGT
GGCTTCACCG GGACGATTGC CGCGCGGGTG CAAAGCAATC TCGGTTTTCG CGTGCCCGGC
AAGATCATCG AGCGTCTCGT GGATACCGGC CAGCAGGTGA AAGCTGGACA ACCCCTCATG
CGGATCGACG AGAACGATCT GCACCTCGCC ATGGTGGCCA AGCAAAACGC TGTTGCCGCC
GCGCGCGCTG CCTTGATTCA GGTGAGCGCC GACGAGAAGC GATATGCCTC CCTGGTCGCG
ACCGGCTATA CGCCAAGGCA GCGCTACGAA ATTGCAAAGG CCGCCCTGGA TACGACGACG
GCGCAACTTG CTGCGGCGGA GGCAGAAGCG CGGGTTGCGG AAAACGAGGC AACCTATTCG
GTCCTGAAAG CAGATGCCGA CGGGACAGTG ATGGAGACAT TGGGGGAACC GGGACAGGTC
GTCGCCGCCG GGCAGACCGT GGTGCGGCTT GCTCATGCGG GACCTCGCGA GGCCATTGTC
GCTCTTCCCG AAACCATGCA CCCGGCGATC GGCACGACGG CGGAAGCAAG TATCTATGGC
ACAGGGCAGC GGCGCTGGTC AGCGCGGCTA CGGCAATTGT CCGACACGGC CGATCCACAG
ACGCGCACCT ATGAAGCGCG CTATGTGCTC GAGGGTGACG CTGCCCTGGC TCCGCTCGGA
GCGACCGTCA CGATCAGAGT AGCGAATGAC GGAAATGCGC CCGGAGTCGA AGTGCCCGTG
GGGGCTGTCT TCGATGATGG CAACAAGATC GGAGTCTGGG TCGTGGATCA AGCTTCATCC
ACCGTCCGCT TCAAGCCGAT CACCATTCAC CGGCTGGGCG AGGAAACCGC CGTGGTCTCC
GGGCTTCAGG CTGGGGAGTC GATTGTGTCC CTTGGCGCTC ATCTGCTGCA TGACGGCGAC
AGCATCAGGA CCTCTGTCGA GAAGGAGGGT TATTGA
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| Protein sequence | MKHTRLLLGL GSGAVILAAA GAATFSFASG SAHPSVDNDP RTASPLVKVT ETVHAGLSQR
GFTGTIAARV QSNLGFRVPG KIIERLVDTG QQVKAGQPLM RIDENDLHLA MVAKQNAVAA
ARAALIQVSA DEKRYASLVA TGYTPRQRYE IAKAALDTTT AQLAAAEAEA RVAENEATYS
VLKADADGTV METLGEPGQV VAAGQTVVRL AHAGPREAIV ALPETMHPAI GTTAEASIYG
TGQRRWSARL RQLSDTADPQ TRTYEARYVL EGDAALAPLG ATVTIRVAND GNAPGVEVPV
GAVFDDGNKI GVWVVDQASS TVRFKPITIH RLGEETAVVS GLQAGESIVS LGAHLLHDGD
SIRTSVEKEG Y
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