| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2542 |
|---|
| Symbol | |
|---|
| ID | 6200129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 2897400 |
|---|
| End bp | 2898713 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641706519 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001833633 |
|---|
| Protein GI | 182679487 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.690759 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAATA TGGCAATCGA GCAATCTAGT TTTGCCAGCT TGGCCGTCGA TGACGACGCG
CTGAAAAAGG CCGCATTCCG CAAAGTGATC TGGAGAATGC TGCCAATACT GACGCTGGGC
TACGTCTTCA ATTTCCTCGA TCGCACCAAC ATCGGATTCG CTGCGCTGCA GATGAACCGC
GACATTGGTT TATCGGCGTC GCAGTTCGGG TGGGGGGCCG GCATCCTATT CATCGGCTAC
TGCGGCTTCG AGGTACCCAG CAATATACTG CTTTACAGGT TTGGAGCCAG GCTCTGGATT
TCACGGATCT TGATCTCCTG GGGCTTGCTT TCCTGCGCCA TGAGCCTCGT GTCTGGCCCC
ACGAGCTTTT ACCTGATGCG GTTCGCATTG GGCGTGGCGG AAGCAGGCTT CTTCCCCGGA
GTCGCTTACT TCCTGTCTGC CTGGTTTCCG GCCCAATATC GTGCCCGGAT CCTCTCCTGG
TTCCTTGTGG CAATCCCCGT TTCCTCGGTG ATCGGAGGCC CGCTCGGAGG ACTGCTGCTG
GAGCTGGACG GTCACCTCGG TTTGGCCGGG TGGCAGTGGC TCTTCATCAT TGAGGGCATC
CCTGCGGTCA TTATCGGTCT GGTCTTGTTG AAGCAGCTGG CCGACCGCCC ACAGGATGCC
GCATGGCTGA CACCGGACGA AAAGCGGGTG ATTGTGGCAA GTGTCGAGAG CGAGAAGCGC
GATCGCGTCG TCAACCGGCT TGGCTTGGCC CTACGCGACA TCCGTGTATG GATGTGCACC
ATTGTCTATC TTGGCTTCAC CGTTGGCTCC TATGGCGTCC AAATCTGGTT GCCACAGATC
CTCAAGCAAC AGAACCTTTC CAATCTTCAA ATTGGATGGA TTTCGGCGCT GCCCTATCTC
GCTGCCAGCG TGGGCATGAT CATTTGGGCA GGCTTCGCCG ATCGTTCGGG TAGAAAGATC
ATTAATCTCT CGACGTGTTG TTTCCTGGCT GTCGTGGGAT TTGTACTCGC CATCGCAACC
AGGCGTTTCG ATCTGTCGCT GCTCGGGCTG ACCGCGGCTC TTGTAGGCGT CACTGGGGCT
CGGGCGATCT TCTGGTCAAT TCCGACGCGC TTTTTGACAG GTATTGCAGC AGCGGGCGGC
ATCGCCTTCA TCAACACGAT TGGCACGACC GGCGGCTTCT TTGGGCCGAC GATCGTGGGC
TGGCTCAAGG ATACGACAGG AACCTTCGAA GCCGGACTGC TCGCGATGGC AGGATTTCTT
GCGGTGTCAA CGGTGTTCGC TCTCCTGCTC AAGCTCGTCA TACACGACGA GTGA
|
|---|
| Protein sequence | MSNMAIEQSS FASLAVDDDA LKKAAFRKVI WRMLPILTLG YVFNFLDRTN IGFAALQMNR
DIGLSASQFG WGAGILFIGY CGFEVPSNIL LYRFGARLWI SRILISWGLL SCAMSLVSGP
TSFYLMRFAL GVAEAGFFPG VAYFLSAWFP AQYRARILSW FLVAIPVSSV IGGPLGGLLL
ELDGHLGLAG WQWLFIIEGI PAVIIGLVLL KQLADRPQDA AWLTPDEKRV IVASVESEKR
DRVVNRLGLA LRDIRVWMCT IVYLGFTVGS YGVQIWLPQI LKQQNLSNLQ IGWISALPYL
AASVGMIIWA GFADRSGRKI INLSTCCFLA VVGFVLAIAT RRFDLSLLGL TAALVGVTGA
RAIFWSIPTR FLTGIAAAGG IAFINTIGTT GGFFGPTIVG WLKDTTGTFE AGLLAMAGFL
AVSTVFALLL KLVIHDE
|
|---|
| |