Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2450 |
Symbol | |
ID | 6199703 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2794293 |
End bp | 2795414 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 641706433 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_001833548 |
Protein GI | 182679402 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTTC CTGTTATCCT GGGGTGTTTC CTCTGTCTTC ATTGTGCCGT TCAGGCTCAC GCGACAGAGC AAATCATTGC ACAGTCTTCG GCGCCAACCA TCGTCGGCAC AACTCTCGTT TCCAAGCAGC CCGTGACCAA GGCTTTGGAG TTTGTCGGCC GTATTGAGGC TGTCAACAAA GTGGAAGTCC GCGCTCGCGT CACCGGTTAC CTAAAGGCGG TCTTGTTCAA GGAAGGCGAC AAGGTTGTGG AAGGCACACC CTTGTTTCGG ATCGAGAAAG AGCCTTTCGA CGCCGCGGTC CAGCAGGCTC AGGGTGCTTT GACCAAGACA AAAGGCATTT TGGCGAATGC CTCGCTCCAG CGTGCTCGTG CGGAGGAATT GCTGGCGAGG CAGGCTGGTA CCGCCACTGT GCGCGATCAA AGGATCGCGG AAGAGCAAAC TGCGCTCGGC GATGTCACGA TGACAAAAGC TCAGTTGGAA TCCGCCGAGA TTAATCTTGG CTATACGAAT ATTACCTCTC CCATCGCGGG CGTTATCGGC CGTACTAATG TGACGAAAGG CAATGTCGTT GGACCTAACA GCGGGATATT GACAACAATC GTCAGTCTGG ATCCAACCTA TGTGGTCTTT CCAGTCAGTC AGCGTGAATT TCTTCGCCTC AAGGATGAAG AACGCAGGGC CGCGGGCGGC GTGCTCAAGG TCGGCCTTCG TTTTTCCGAT GGCTCGGCCT ATGAACAGAG TGGTCGGGTC AATTTCGTCG ATGTGACCGT CGACAAATCA ACCGATACCG TCACCGTGCG GGCGAGTGTG CCCAATCCCG GCGGGACGCT CATCGATGGC CAGTTGGTGC GGGTCATGGT GGAAGGCGAT AAGCCGCAAG AAAGAATCAC GGTTCCGCAA ACCGCGCTGC TTGCCGACCA ACAAGGCGCC TACGTCTTTG TCGTTGAAGA TGGCAAGGCC GTGATCCGTC GCCTGAAACT TGGCGGTGAG ATTGGATCCG ATGTGATCGT CGATAACGGC CTCACGGGCG GCGAGCAAAT TATCGTCCAG GGGATTGAAC GGGTGCGTCC CGGCGGGGCC GTGACAGCCA GCCCGGTCGC GCCGGTCACC GACAGGAGCT GA
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Protein sequence | MRLPVILGCF LCLHCAVQAH ATEQIIAQSS APTIVGTTLV SKQPVTKALE FVGRIEAVNK VEVRARVTGY LKAVLFKEGD KVVEGTPLFR IEKEPFDAAV QQAQGALTKT KGILANASLQ RARAEELLAR QAGTATVRDQ RIAEEQTALG DVTMTKAQLE SAEINLGYTN ITSPIAGVIG RTNVTKGNVV GPNSGILTTI VSLDPTYVVF PVSQREFLRL KDEERRAAGG VLKVGLRFSD GSAYEQSGRV NFVDVTVDKS TDTVTVRASV PNPGGTLIDG QLVRVMVEGD KPQERITVPQ TALLADQQGA YVFVVEDGKA VIRRLKLGGE IGSDVIVDNG LTGGEQIIVQ GIERVRPGGA VTASPVAPVT DRS
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