| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2431 |
|---|
| Symbol | |
|---|
| ID | 6200126 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 2774468 |
|---|
| End bp | 2775010 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641706414 |
|---|
| Product | alkylhydroperoxidase |
|---|
| Protein accession | YP_001833529 |
|---|
| Protein GI | 182679383 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2128] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00777] alkylhydroperoxidase, AhpD family
[TIGR00778] alkylhydroperoxidase AhpD family core domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGATCG ATAGCCTGAA AGACAAATTG CCGGATTTCG CCAAGGATGT TCGGCTCAAT
CTCTCCAACA TCGCCAATGA CGATACGTTG GGGGAGCAGA CCAAATATGG CTTAATGCTG
GCCTGTGCCG TCGCCACCCG CAATGCGGAG GTCCTGAAGG CTTTCGACCA GGAATGCACG
CCGCATCTGG CACCCGCTGC GCGGGACGCG GCGCTCGCCG CCGCCACGAT CATGGCGATG
AACAATGTCT ATTACCGCTT TGTCCATCTC GCCTCGAACA AAGCTTATGG CACGTTGCCC
GCCAAGCTGC GGATGAATAT CATCGGCAAC CCCGGTGTGC CCAAGACCGA TTTCGAGCTC
TGGTCGCTTG CCGTCTCAGC CATCAACGGC TGTGGCATGT GCATCGACTC GCACGAGAAA
GTTCTGCTCA ACGCAGACAC GACCCAGGAC ACGATTCAGA CTGCGGTGCG CTTTGCCGCG
ATCATCCAAT CCACGGCCGT CGCGCTTGAA GCAGCGAGCC TGCCGGTGTC TGCCGCCAGC
TAA
|
|---|
| Protein sequence | MSIDSLKDKL PDFAKDVRLN LSNIANDDTL GEQTKYGLML ACAVATRNAE VLKAFDQECT
PHLAPAARDA ALAAATIMAM NNVYYRFVHL ASNKAYGTLP AKLRMNIIGN PGVPKTDFEL
WSLAVSAING CGMCIDSHEK VLLNADTTQD TIQTAVRFAA IIQSTAVALE AASLPVSAAS
|
|---|
| |