| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2343 |
|---|
| Symbol | |
|---|
| ID | 6200425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2680213 |
|---|
| End bp | 2680800 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641706328 |
|---|
| Product | peptidyl-prolyl cis-trans isomerase cyclophilin type |
|---|
| Protein accession | YP_001833445 |
|---|
| Protein GI | 182679299 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.228752 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAAAAT CCAACATTTT TCAACGACGG ATGTTTTGTC TTCTGCTCGC CGCTTTGCCC
GTCCTCGGCA TGGCTGGTGA GATGGCCTCG GCTGCCAAGG CGGCGGCTCC AGATCCGTAT
CACACGGTCT ATCTCGACAC CAAGGATGGC CGCATCACCA TCGCGCTGCG GCCCGATCTC
GCTCCGAAAA CCGTTGCTCA GATCGAGACT TTGACGCGGC GTGGCTTTTA TGACGGCATT
GTCTTCCATC GGGTGATCGA TGGTTTCATG GCTCAGACGG GTGATCCGAC CGGCACCGGC
ACCGGCAAAT CCGATTTGCC GAATGTTCCG GCTGAATTCA CCTCAACGCC CTTTAAGCGC
GGCACGGTCG GCATGGCCAG GGCGCAAGAT CCCAATTCCG GCAATTCGCA ATTTTTCATC
ACGTTCGCGG ACGCCGATTT TCTCAACAAT CAATATACAG TCGTAGGGCA GGTCGTGTCC
GGCATGGATG TCGTCGACAA GATCAAGAAG GGATCGTCCA GCAATAATGG CTCGGTCAGC
AATCCCGACA AGATCATCAA GATGCGTATG GCCGACCAAG AGAAATAA
|
|---|
| Protein sequence | MSKSNIFQRR MFCLLLAALP VLGMAGEMAS AAKAAAPDPY HTVYLDTKDG RITIALRPDL
APKTVAQIET LTRRGFYDGI VFHRVIDGFM AQTGDPTGTG TGKSDLPNVP AEFTSTPFKR
GTVGMARAQD PNSGNSQFFI TFADADFLNN QYTVVGQVVS GMDVVDKIKK GSSSNNGSVS
NPDKIIKMRM ADQEK
|
|---|
| |