| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2296 |
|---|
| Symbol | |
|---|
| ID | 6199771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2626865 |
|---|
| End bp | 2628664 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641706281 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_001833398 |
|---|
| Protein GI | 182679252 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCCCA TGTCTTCGCA TATCGATGGC CTGCCGGAAC AAGGATATCA GCCCATTCTC
GCGGTGGGAG GCTTGTTTGG GCGCGGTACC GGACCGCAGA GCCCGAACGA GGCCTTGCAG
CCGCAGGCAG CGCCGCCGCC GCCCCCTAAC AAGCCCTCGA ACCGTCGGCG CGGACGCCTT
TCGGCCTTTA GCGGCTTTCT CTCCTTTTTA TTGATCGCCG CGATCGGCAT CATGGTCGTG
CTGATCTGGA CCCAGAGGAA AATGCAGGAA CCGGGGCCCC TGACGGCGGA CCGAGTTGTC
TTCATCGCGC CTGGCACGGA AGTGCCCGAC ATCATCGCCC GCCTTGATCG CGAGGGGATT
ATCGATAGTC CGCTGGGACT CAATATTGCC TTGCTGGTCG AGGGCAAGCG CTCCAAGGTC
AAGGCTGGTG AATATCTTTT CAAACAGGGT GCGAGCCTGC GTGATGTGAT GGACACGCTC
GTCAGCGGCA AACAAGTCTT GCACGCCCTG ACCCTGCCCG AGGGACTGAC CAGCACCCAG
ATCGTCGCGC GCATCATGGA AGATGATGTC CTGCAAGGCG ATATCCGAGA TGTTCCTAAG
GAAGGTACGA TCCTTCCTGA AACCTATAAA TTTACCCGCA ATTCCTTGCG CGCCGACCTC
GTTCGCAAGA TGCAGGAAGA TCAAAAGCGT ATCGTCGATC AGGTTTGGCA GAGGCGGGCG
AGCGATCTTC CTTTGAAATC CCCTTACGAA CTGGTCATCC TGGCCTCGAT CGTCGAAAAG
GAAACTGGCA AGGCGGATGA GCGGCCCCAT GTGGCCAGCG TGTTTCTCAA CCGCCTGCAG
AAACGTATGC GGCTGCAATC GGACCCGACG ATCGTCTATG GTCTGGTTGG CGGCAAGGGG
ACGCTCGGCC GGGCCATTCT GCGTTCCGAA GTCGAGAAGC CGACCCCTTA TAATACCTAT
GTGATCGACG GCTTGCCGCC GGGCCCGATC GCCAATCCCG GCCGGGCGGC GCTTGAGGCC
GTCGCGAATC CTTCCCGCAC GCGTGACCTC TATTTCGTCG CCGATGGCAC CGGCGGACAT
GTCTTTGCCG AAACACTCGA TCAACATGTG CGCAATGTTC AGAAATGGCG GCAGATCGAG
CACGATGCCA AGGAGAAGCA ACAGGCCCCT GATGTCGACA AAATTGCACC CACGCCTGAT
CAGCATGGGG AAGCCGATTT TCCGGGTGCC GTCTATGGCG GCTTGCCGCC CGCTTTGGCG
ACACCGTCCG CCGCAGCCTT ATCGTCCCTG CGCAATGCCC TCGTGAAGGA ACAAAAGGGG
GGTGCCCTTT CGGCGAAGGC GGGAGAGGCT AAACTGGCGC GTGCGTCAGC CGCGGCCGCG
CAAAAATATG GCCTTGGCCC GGGGCTTGAC GAATTGGGTC TCTCGATTCG GGGCGTGCCC
TCGGGTGCGG AAGCTGCGGC TGCGCTTGAC GGGCCGATTT CGGCGGAGAC AGCGGAAGCC
GCTGGGGGAT CGATGGTTCT GCCGGTTTCC GCTGCACGCC GGGCGGAACA AAAAGCCCGG
GCCATGCGCC TGGGGCTCGA ACCCGGCAGG GACGAACTCC CAGCTGAAGC TCCTGCCGAT
TCTAGCGTTG CCGTATTGAC GCAGCCCCAG CAGGAAGGGC GTGCTGCCGT TCATGGACCG
CACCATGGGG TCACGGATGC CTCCGAGGGC AAGTCGTTCG ATCCCTTGCT CGACAAGACC
TATGATCTCA ACTATGCGAA GACGGTCCCT GTCATCGGAA AAAATGATCC GCGGCTTTAA
|
|---|
| Protein sequence | MAPMSSHIDG LPEQGYQPIL AVGGLFGRGT GPQSPNEALQ PQAAPPPPPN KPSNRRRGRL
SAFSGFLSFL LIAAIGIMVV LIWTQRKMQE PGPLTADRVV FIAPGTEVPD IIARLDREGI
IDSPLGLNIA LLVEGKRSKV KAGEYLFKQG ASLRDVMDTL VSGKQVLHAL TLPEGLTSTQ
IVARIMEDDV LQGDIRDVPK EGTILPETYK FTRNSLRADL VRKMQEDQKR IVDQVWQRRA
SDLPLKSPYE LVILASIVEK ETGKADERPH VASVFLNRLQ KRMRLQSDPT IVYGLVGGKG
TLGRAILRSE VEKPTPYNTY VIDGLPPGPI ANPGRAALEA VANPSRTRDL YFVADGTGGH
VFAETLDQHV RNVQKWRQIE HDAKEKQQAP DVDKIAPTPD QHGEADFPGA VYGGLPPALA
TPSAAALSSL RNALVKEQKG GALSAKAGEA KLARASAAAA QKYGLGPGLD ELGLSIRGVP
SGAEAAAALD GPISAETAEA AGGSMVLPVS AARRAEQKAR AMRLGLEPGR DELPAEAPAD
SSVAVLTQPQ QEGRAAVHGP HHGVTDASEG KSFDPLLDKT YDLNYAKTVP VIGKNDPRL
|
|---|
| |