| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2191 |
|---|
| Symbol | |
|---|
| ID | 6201108 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2505138 |
|---|
| End bp | 2506706 |
|---|
| Gene Length | 1569 bp |
|---|
| Protein Length | 522 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641706182 |
|---|
| Product | carbohydrate kinase, YjeF related protein |
|---|
| Protein accession | YP_001833300 |
|---|
| Protein GI | 182679154 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
|---|
| COG ID | [COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase |
|---|
| TIGRFAM ID | [TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.755695 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.636409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAAG CGCTCCCCCT CGAACTTCTC AGCAATGCGG AAACGGCCGA GGCCGACAGA
TTGACGATCA ACTCCGGCGT GCCCGGATCT TTCCTGATGG AGCAGGCGGG CGCTGGCGTG
GCGCGCGAGG CTCTGCGTCT GTTGCCCGAT GAAGGCTGTA TCGTCGTATT GTGCGGGCCG
GGTAATAATG GCGGCGACGG TTTCGTCGCC GCTCGCCTTT TGTCCGTGCA TGGTTTCGAT
GTCCGGCTTG GTCTCTTGGC CGCGCGCGAT GCCCTGCATG GTGATGCCGA TAGTGCCGCG
CGTGCGTGGA ACGGGCCGAT TACTGCGGCA CATGAAATCA ATCTGGAGCA CGCGGATCTC
GTCATTGATG CTTTGTTCGG TGCTGGCCTT TCGAGGCCGC TCGAGGGAGC CGCGCGGGAT
CTCGTGTTGC GTGTCAATGA ATGGAGTGAA AAAACCGGCA AACCGGTCCT TGCCGTCGAT
CTTCCCTCGG GCATCAATGG GACAAGTGGC CAGATCCTGG GTGTCGCGAT CAAGGCGCGA
CGCTCGGTCA CATTTTTTCG TCGTAAGCCC GGACATGTTC TTTTGCCGGG ACGCATACAT
TGTGGTGAAA CCGTTGTCGT CGGCATCGGC ATTGCCGAAT CCGTTCTGGC TGAAATCAAG
CCCCAGACCT TCTTGAACCG GCCAGCCGCC TGGGAGCGGG ATTTTCCGGT GCCGCGCATC
GAGGGCCATA AATATTCACG AGGTCATGCG GTCGTCGTTT CCGGCCCGGT AGCACAGACC
GGCGCTGCGC GGCTCGCAGC GCGCGGAGCC TTGCGTGCAG GAGCGGGTCT GGTTACGGTC
GCGACCTCCA GCGAGGCCTT ATTGGTCCAT GCGTCCGCGC TGACCGCGAT CATGACGCGT
GTCTGCGACA GTCCGGCTGA TCTGCGCAAG CTGCTCGAGG ATCATCGCAA GAATGTGGTG
GTGATCGGCC CCGGATTGGG GGTCGGTGAG GAGAGCCGCC TATTGGTCGA AACGATCCTG
CAAGCCAGTG GCCCGGCTGC CGGAACGCAT GCGGGATCGC CACGGGCCTT CGTTCTTGAC
GCTGATGCCT TGACCAGTTT CGCTCAGGAA AGGCAGCGGC TTGCCAAAGC GATTGCGGCT
TCCGGGGCGC CGGTCGTTCT GACGCCGCAT GAGGGCGAGT TCGGCAATCT TTTCGCCGAT
CGGGGTGATT TCGCCGGGCG CTCGAAGCCT GATCGTGCGC GGGCGGCGGC GCAGGCCATG
GGGTGTGTGA TCCTGTTGAA GGGGCCGGAT ACTGTTGTCG CCGAGCCGCA CGGGCGCGCG
ACGATTGCTG ATAACGCGCC ACCGTGGCTC GCGACGGCGG GCTCCGGCGA TGTGCTTTCC
GGGATGATCG GCGGTCTGCT CGCGCAGGGC ATGCCGGCCT TCGAGGCGGC TTCCGCAGCC
GTCTGGTTGC ATGGCGTGAG TGCCACCCGT TTCGGACCCG GTCTCATCGC CGAGGATTTG
CCCGAAATGT TGCCTACGGT GCTGCGTGAC TTGATGGAGC CGAGTCGCGA GGATGAAATG
ACTTTATAA
|
|---|
| Protein sequence | MSQALPLELL SNAETAEADR LTINSGVPGS FLMEQAGAGV AREALRLLPD EGCIVVLCGP
GNNGGDGFVA ARLLSVHGFD VRLGLLAARD ALHGDADSAA RAWNGPITAA HEINLEHADL
VIDALFGAGL SRPLEGAARD LVLRVNEWSE KTGKPVLAVD LPSGINGTSG QILGVAIKAR
RSVTFFRRKP GHVLLPGRIH CGETVVVGIG IAESVLAEIK PQTFLNRPAA WERDFPVPRI
EGHKYSRGHA VVVSGPVAQT GAARLAARGA LRAGAGLVTV ATSSEALLVH ASALTAIMTR
VCDSPADLRK LLEDHRKNVV VIGPGLGVGE ESRLLVETIL QASGPAAGTH AGSPRAFVLD
ADALTSFAQE RQRLAKAIAA SGAPVVLTPH EGEFGNLFAD RGDFAGRSKP DRARAAAQAM
GCVILLKGPD TVVAEPHGRA TIADNAPPWL ATAGSGDVLS GMIGGLLAQG MPAFEAASAA
VWLHGVSATR FGPGLIAEDL PEMLPTVLRD LMEPSREDEM TL
|
|---|
| |