| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2185 |
|---|
| Symbol | tig |
|---|
| ID | 6199270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2497905 |
|---|
| End bp | 2499287 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641706175 |
|---|
| Product | trigger factor |
|---|
| Protein accession | YP_001833294 |
|---|
| Protein GI | 182679148 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) |
|---|
| TIGRFAM ID | [TIGR00115] trigger factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.368629 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.570218 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTGA CCGAAACCCT CTCGCAGGGT CTCAAGCGCG AATATAAAGT GGTCCTCCCG
GCTGCCGACA TCGCGTCCCG CCTCGACGAG CAACTGCAAG AGATGAAAGC CAAGGTGCGG
ATTAATGGTT TTCGCCCTGG CAAGGTGCCG GTTGCCCATC TGAAGCGTCT TTATGGCCGC
TCCGTCATGC TCGACGTGGT GCAGGAGGCG GTCAACGAAG CCAATCGCAA GATTCTTGAA
GAGAATAACC TGCGCCCCGC CGGTGAGCCG CGAATCGATT TCGACGGCGA AAAGGAGGAT
ATGGAGAAGG CGTTCGAATC CACCGCCGAT TTCGCCTTCA AGGTCGCCTT GGAAATCCTG
CCGAAATTCG AGATTGGTGG TTTCGAGGAT ATTGCGATTG AACGTTTCGT GGCGGATGTC
CCCGAAGAGG AAGTCGAGCG GATTCTCGGC CGATTCGCCG ATCAGAATCG CGCCTATGAA
CCGAGGGCTG AAGGTGCCGC CGCTGAAAAG GGCGACAAAG TAACGATTGA TTTCGTTGGC
AAGATCGACG GTGAGCCTTT TGAAGGCGGC AGCGGCGAGG ATATCGATCT TGTGCTTGGC
TCCGAGAGCT TCATTCCGGG CTTCGAGGAT CAGGTCATCG GATTGAAGGT TGGCGAACAG
CGCCAGATCG CGGTCACCTT CCCGGAAGAT TATGCCGCCA AGCTTGCCGG CAAAGCTGCG
ACCTTCGACG TAACCGTGAA ACAGGTCGCC GCGCCGGGTG AGCAGACGAT CGACGACGAA
TTGGCCAAGG CCTTCGGCTA TGAAACGCTC GAAGCCATGA AGGAGCAGAT TCGCACGACG
ATTTCGGATG AATATGCCGC GGCCTCGCGC GCGCAATGGA AGCGCGCTCT GCTCGACGAA
CTCGACAAGA AATATCAGTT CGAATTGCCG GAAGGTCTGG TCGAGAACGA ATTCGCGACA
GTTTGGCGCA AAGTCGAACT CGATCAACAA AGAAGCGGCA AGACCTTCGA GGAAGAAGGA
ACGACCGAGG AAGCCGCGCG CGCCGATTAT CGCAAGATCG CCGAGCGTCG GGTCCGGCTG
GGCCTGTTGC TGGCGGAAAT TGGTGAAAAG GCCGGGATCG TGGTTCCCGA CGAGGAAGTC
GGCAAGGCTC TGGTCGAGCG CGCACGCGCT TTTCCGGGTC AAGAAAAGAT GATCTGGGAT
TTTTATCGCC AGAACCCGAA GGCTCTGAAC GAAATTCGCG CGCCTTTGTT CGAAGACAAG
ACGGTCGATT ATATTTTGAC GCAGGCCAAG GTGACCGACA CCAAGGTGTC GAAAGATGAA
TTGCTGAAAA AGGCGCAAGA GGCGGAAGAA AGCGAACCTG CGGAAGAAGC GGTTTCCGAA
TAA
|
|---|
| Protein sequence | MQVTETLSQG LKREYKVVLP AADIASRLDE QLQEMKAKVR INGFRPGKVP VAHLKRLYGR
SVMLDVVQEA VNEANRKILE ENNLRPAGEP RIDFDGEKED MEKAFESTAD FAFKVALEIL
PKFEIGGFED IAIERFVADV PEEEVERILG RFADQNRAYE PRAEGAAAEK GDKVTIDFVG
KIDGEPFEGG SGEDIDLVLG SESFIPGFED QVIGLKVGEQ RQIAVTFPED YAAKLAGKAA
TFDVTVKQVA APGEQTIDDE LAKAFGYETL EAMKEQIRTT ISDEYAAASR AQWKRALLDE
LDKKYQFELP EGLVENEFAT VWRKVELDQQ RSGKTFEEEG TTEEAARADY RKIAERRVRL
GLLLAEIGEK AGIVVPDEEV GKALVERARA FPGQEKMIWD FYRQNPKALN EIRAPLFEDK
TVDYILTQAK VTDTKVSKDE LLKKAQEAEE SEPAEEAVSE
|
|---|
| |