Gene Bind_2178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2178 
Symbol 
ID6200536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2488792 
End bp2489145 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content53% 
IMG OID641706167 
Productqueuosine biosynthesis protein QueD 
Protein accessionYP_001833287 
Protein GI182679141 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.371631 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCA CCCAAGCCTT TCATTTCGAG GCCGCCCATC GTTTGCCAAA AGTGCCGGAA 
GGCCATCGCT GCGCCAACTT GCACGGCCAT TCCTACCGCG TCGAACTGTA TCTCGAAGGA
CCAGTCGATC CGGATACCGG CTTTGTTATC GACTTTTTCG ATATTGAAGC CGTTTTCGGC
CCGTTGTTGC ACAGGCTCGA TCATCATTAT CTGAATGAGA TCGAAGGGCT CGAAAACCCA
ACAGCCGAAC TCATCGCTGT CTGGATCTGG GACCGTGTCA AACCGTCACT GCCGCAACTC
GTCAAGGTCA TCGTCTACGA GACACCAGAT TGTTGGGCTG AATACGAAGG GTGA
 
Protein sequence
MKITQAFHFE AAHRLPKVPE GHRCANLHGH SYRVELYLEG PVDPDTGFVI DFFDIEAVFG 
PLLHRLDHHY LNEIEGLENP TAELIAVWIW DRVKPSLPQL VKVIVYETPD CWAEYEG