Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2118 |
Symbol | |
ID | 6201042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2417681 |
End bp | 2418781 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641706104 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001833227 |
Protein GI | 182679081 |
COG category | [F] Nucleotide transport and metabolism [L] Replication, recombination and repair |
COG ID | [COG0350] Methylated DNA-protein cysteine methyltransferase [COG2169] Adenosine deaminase |
TIGRFAM ID | [TIGR00589] O-6-methylguanine DNA methyltransferase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0669009 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGTCAGC ATGCTCTTCC AAGGGGTACA CAGCCCGCCG TCCCGATCGA GGATGATCCG CGTTGGATAG CCGTTGTCGA TCGCGATTCT CGTTTTGACG GCACCTTCGT CTATTCCGTG AAAACGACAG GTATTTATTG CCGGCCGTCC TGCCCCTCAC GTCTGGCGAA GCCAGGCAAT ATCCGTTTTC ATGCTCATTG CGCGGCCGCG GAAAAAGCAG GGTTTCGGCC GTGCCTCAGG TGCCGTCCAC ATGAGGCGTC GCTCGCGCAC GATCATGCCG ATCTGATCGT TGCGGCCTGC CGCCGGATTG AAACGGCGCA GAAGCAACTG AGCCTGGATC AATTGGCGAA GGCCGCCGGC CTGAGCCCGT TTCATTTTCA CCGATTGTTC AAATCGATCA CCGGCCTGAG CCCGAAAGCC TATGGCGCTG CCCATCGCAT GAACAAGATC CACAAAGCGC TCAGTGCGGG TGAGGAAAGT GTGACGGCAA CGATCTACGC CTCTGGATAT CAGTCATCGA GCCGTTTCTA TGCCACCTCA AAGGAGATGT TGGGGATGAC CGCGACTGCA TTCCGAGAAG GAGGCAACTT GGCCGAAATC CGCTTCGCGC TAGGTGAAAC CTCGCTCGGC TCCCTTCTTG TGGCCTGTAG CGCGCAAGGC GTTTGTGCCA TTTTCCTTGG CGATGATCCG GAGGCGCTCG TCCATGAATT GCAGGGGCGG TTTCCGAAAG CGCATCTCAT CGGCGGTGAC GAAGGTTTCG AGGCTCTGGT CGCCAAGGTC GTCGGTTTCG TCGAAACGCC CGCACGCGGC CTCGATCTGC CGCTGGATAT TCGTGGTACG GCGTTTCAGC ACAAGGTCTG GCAGGCCTTG TGTGAAGTTC CTTTCGGAGA GACTGCCAGC TACACTGACA TCGCCCGGCG GATTGGCGCG CCCAAGGCCG TCCGCGCCGT GGCGCAAGCC TGCGCTGCTA ACAAGATCGC CGTGGCTATC CCCTGTCATC GTATTTTGCG TACTGACGGA AGCTTGTCTG GCTATCGCTG GGGCGTCGAG CGCAAGCGCG CCTTGCTTTT GAAGGAGGGC GCTACGAAGA ATTCGAACTG A
|
Protein sequence | MRQHALPRGT QPAVPIEDDP RWIAVVDRDS RFDGTFVYSV KTTGIYCRPS CPSRLAKPGN IRFHAHCAAA EKAGFRPCLR CRPHEASLAH DHADLIVAAC RRIETAQKQL SLDQLAKAAG LSPFHFHRLF KSITGLSPKA YGAAHRMNKI HKALSAGEES VTATIYASGY QSSSRFYATS KEMLGMTATA FREGGNLAEI RFALGETSLG SLLVACSAQG VCAIFLGDDP EALVHELQGR FPKAHLIGGD EGFEALVAKV VGFVETPARG LDLPLDIRGT AFQHKVWQAL CEVPFGETAS YTDIARRIGA PKAVRAVAQA CAANKIAVAI PCHRILRTDG SLSGYRWGVE RKRALLLKEG ATKNSN
|
| |