Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2092 |
Symbol | |
ID | 6200226 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2392257 |
End bp | 2394269 |
Gene Length | 2013 bp |
Protein Length | 670 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641706079 |
Product | TonB-dependent receptor |
Protein accession | YP_001833202 |
Protein GI | 182679056 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTCTCCC CATCCTTGCG CATGGCGCAA AGCGGATTCT TTCCGCGCGC TTTATACCAT TCGTGTTTTC TTTCCTGTCT CTTGACGTCC TCCGCATTCA GCGAGGAAGC CTTGCCCGCT CTCATTGTCA CGGCTGACCG TGTCGAGGAG CCAATTTCCC GCACCGCATC CTCGATAACG ATCATCCCTT CGGAGGAAAT AGAGAAACGG GGCACTTTCG GCCTGCCGAA CGTATTGCGC GGCGTTCCAG GGCTTGATCT TTACGAAACT GGCGGTCCCG GCACCGCCAC TTCGGTTTTT CTGCGTGGTT CGGCCCCTGG ACAAACCTTG GTGCTGATCG ATGGCATGCG TATCGGCGAT CCCTCCTCGA TCGATGGCTC TGTCGATCTC GGTGGCCTCG TCGCCACGGA TCTCGACCAG ATCGAGGTGC TGCGTGGTCC GCAATCGGCC CTCTATGGTT CGGCTGCCAT GGGCGGCGTC ATCAATATCG TCACACGCAA AGGCAGCGGC GCGCCACGCG CCTCAGTCCT CATGGAAGGG GGCAGATATG GCACGGCGCA CACACGCGCA GCCCTGTCCG GCGGCACTGA CCGCCTCTCC TACGCATTCT CCATTGATGG CCTTTATACG TCTGCCTTTC CACGCTACGG CTATCGCATC ACGAGGCCTC TGACGATCGG CGATGGCGTG ACACCCCTAC CACCAGCGCC GTCAAGCGAC CCAACCCGCA AAGGAGGCTT CCACGGTCGC CTCGCCTATA ACTTTACGAA CGATATTTCA ATCGAGGGCG GTGTGATCGG CTATGATAGT TCAATCCGCT TCGACAATCC TTACGCATAC AATACTGCTG ACATCTTCAA TCCCTATAAT CATCAGCATG CAACCTTCCT GCAAGGTTAT CTCCTGGGCA AGGCCGACCT GTTCGACCAT TTTCTGCACA ACCGCCTGAG CCTTTTCGGC AATATCACCG ACCACTCGGT CTGGCAGGCC CAATCCTGCT ATGACACCGC CTATAACGCA TTCGACTGCC GCATGGGTTT TCGCGGCGCG CGGCGCGGCG GCGAATATCA GGGTGATGCG GTCCTCGGCT CCTTGGGCCT TTTCACTTTC GGGGTGCGTC TTGAGAAAGA AGTCGCGGAC ACGTCACAGG ACCCAGCGCC GCCCGGTGCT TTTGATCCGA TCCATGCGAG CCAGACCACT TATTCCGGCT TTGCACAACA TCAGCTCACC CTGTTCGACC GGTTCGATAT CACCTATGGC GGGCGCATGG ACGCCATTGA CAAAGGCCCA ACCTTTACAA CCTGGAGAGC AACCGGTGCC TATCGGATCG AGGAGACGGG AACCAAGCTG CGCGCAAGCG CAGGCACTGG CGCGCGTATC GGCTCGCTCT ATCAAAGGTT TAGCCAATAC GGCAATCCCG CGCTCGCACC CGAATATAGC ATCGGCTATG ATGCAGGTAT CGAGCAAACC CTGTTCGGCG GACATGTCTC GTTCTCAGCC AATTATTTCG AAAACAGATT TCGCAATCTG ATCGATTTCG GCATGTCGGC GAGCTGCTTC GCGATTCAGG TCTCCGGCTG TTACAATAAT ATCGGGCGAG CCGAGACGAA AGGCGTCGAA TTCGCCAGCG AAGCCGTCCT TATTCCCGAC GAATGGCGCC TCCGCGCGAG CTATACGCAT CTCGTCGCGA CGAATTTAGA CACACAGCAG CGCGTGCCAC GGCGCCCTCG CGACAAAGGC ATGCTGTCGA TCATCTATAG CGCCATTCCG GATTTCGAGT TCGAGGCACG CGGCCTTTTT GTCAGCGCGA CGCCCGATTA CGACTATACA TACGGCCACG CCGTCATGCT CCCGGCCTAT GCACGGATCG ACCTGTTCGC CAGCTACAAA CTGAATGAAA CCGTGACCTG TTTCGCGCGC ATAGAGAATG TCAATGATGC ACGCTACGAG GAAGTCTATA ATTACGGAAC GCCAGGGCGG TCCCTCTACG GAGGCCTCAG AGTGACATGG TAG
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Protein sequence | MLSPSLRMAQ SGFFPRALYH SCFLSCLLTS SAFSEEALPA LIVTADRVEE PISRTASSIT IIPSEEIEKR GTFGLPNVLR GVPGLDLYET GGPGTATSVF LRGSAPGQTL VLIDGMRIGD PSSIDGSVDL GGLVATDLDQ IEVLRGPQSA LYGSAAMGGV INIVTRKGSG APRASVLMEG GRYGTAHTRA ALSGGTDRLS YAFSIDGLYT SAFPRYGYRI TRPLTIGDGV TPLPPAPSSD PTRKGGFHGR LAYNFTNDIS IEGGVIGYDS SIRFDNPYAY NTADIFNPYN HQHATFLQGY LLGKADLFDH FLHNRLSLFG NITDHSVWQA QSCYDTAYNA FDCRMGFRGA RRGGEYQGDA VLGSLGLFTF GVRLEKEVAD TSQDPAPPGA FDPIHASQTT YSGFAQHQLT LFDRFDITYG GRMDAIDKGP TFTTWRATGA YRIEETGTKL RASAGTGARI GSLYQRFSQY GNPALAPEYS IGYDAGIEQT LFGGHVSFSA NYFENRFRNL IDFGMSASCF AIQVSGCYNN IGRAETKGVE FASEAVLIPD EWRLRASYTH LVATNLDTQQ RVPRRPRDKG MLSIIYSAIP DFEFEARGLF VSATPDYDYT YGHAVMLPAY ARIDLFASYK LNETVTCFAR IENVNDARYE EVYNYGTPGR SLYGGLRVTW
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