Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2079 |
Symbol | |
ID | 6200560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 2377499 |
End bp | 2378248 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641706065 |
Product | regulatory protein GntR HTH |
Protein accession | YP_001833189 |
Protein GI | 182679043 |
COG category | [K] Transcription |
COG ID | [COG2186] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.744782 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCCGC ATGACAAGAA TACCTCTCCC ATTGCCTCGG TCGTCGGCTC TTCGCTCGGC TTAAAGCGCA CGGTGAAGGA GGCGATCGGC GACAGGATCG AGGACTTGAT CGCGTCCGGT ATTCTCCAGC TTGGTGATGA ACTCCCGAGC GAGCGCGAAC TGGCCAAAAT GCTTTCCGTC AGCCGGGAGA CCGTGCGCGG CGCCATTCAG ACCCTCTCCG CACGCGGCAT TGTCTCGGTT TCACAAGGGG CACGGACGCG TGTCGCCAAT GTTTCGGTGG CGCAGCGGCG CGGTGGTCTT TCCACGCTCG GCACGATCGA CACCTACGAT CTCGAAACGG TTCACGCGTC GAGGCTGCTC GTCGAACGAG CCGTTGTAGC GGATGCGGCG CGGCATATTT CCGCGCAGAC GCTCGCCTTT CTCGATGCAT CGCTTGTGGC CCAGCATGAG GTGCTCGACG ATCCCATGCG CTTTCTGATC TATGACCGAG AATTCCATCT CGCCATCTAC CATTCCGCAA GCAATCCGTT ACTCGCGGAT TTCGTGACCG ATCTTTACAC CTATATGCTC GACCGGCGCC GTGTAGCAAT GTCGAAACCA GACGCCATGA ACCAGAGCTA CGAGGATCAT GCCGCGATCG TCGAGGCCTT GAGGTCCCAC GACCCAGAAG CCACGAGCCT GGTTTTCGAT CGTCACATTA ATCGTATTTA TGCGACCAGC AAAAAGCTCA TGGGAAGCGG GTCGCAATAG
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Protein sequence | MSPHDKNTSP IASVVGSSLG LKRTVKEAIG DRIEDLIASG ILQLGDELPS ERELAKMLSV SRETVRGAIQ TLSARGIVSV SQGARTRVAN VSVAQRRGGL STLGTIDTYD LETVHASRLL VERAVVADAA RHISAQTLAF LDASLVAQHE VLDDPMRFLI YDREFHLAIY HSASNPLLAD FVTDLYTYML DRRRVAMSKP DAMNQSYEDH AAIVEALRSH DPEATSLVFD RHINRIYATS KKLMGSGSQ
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