| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_2031 |
|---|
| Symbol | |
|---|
| ID | 6199863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 2320991 |
|---|
| End bp | 2323540 |
|---|
| Gene Length | 2550 bp |
|---|
| Protein Length | 849 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641706018 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001833142 |
|---|
| Protein GI | 182678996 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGAAGC AAAAGCTGCT CATGGGGAGC GCTCACACTT TTTCGGTTTT CACACTGATC
CTGGGCGCGT CCGGACATTC CCTTGAGGCC CAAGAGTCAC CGACAAGTGA TCAAGTTCAA
GCTTCGGCGG TGGTCCAGGA TGTCGTCGTC ACCGGTGGCG GCTGGGAACG GCCACGGAGC
GACCAACGCG TCATTCTCGA CAGCCCGTCG CCCATCGATG TGATCAGCGC TCAGCAATTG
CACCAGACGG GGCGCGCCGA ACTCAGCGAG GCCATCACAA AACTTCTGCC CGCTTTCAAT
TTTGGCAATA CAACAGCTGG TGTCAATTCG ATCGTGCGGC CTGTCACCAA CCATGGTCTC
GGGCCCGCCT ATACATTGGT GCTCGTCAAT GGCCAGAGGC GACACAATAG CGCGCTTCTG
ACCAATGGCG GTGGCGACAC CAGCGGCGTC AATCCGGTCG ATATCGACAT GATCCCCTTG
AGCGCGGTCG ATCATATCGA AGTGCTGCGC GATGCCTCCG CCGCGCCTTA TGGCTCCGAT
GCCGTCGCCG GAGCCATCAA CATCATCCTG AAATCGAGCG ACCATGGAGG TCATGCCGCA
GCATTGGCCG GTAATCTTTA TCAGGGCAAT CCGGGAAGCG ACCGTTCAAC CGCCAAGGGC
GAGGCCGATG CCGGCTTCAA ACTCGGCGAC GAAGGAGGTT TCGTCCATAT CAGCGCCGAT
GTGCGCAAAC GCGGCATGGA CTGGTGGAAT TTCTACGCGA AAAACCTGCC CTACTCACCC
GCTTCAAATC CGCTCAACGC CACGTGGACT GGTGACGGCG CCCACAATGG GGACCCCGAA
ATCAGGGCGT ATAATCTCGC CTATAATGCC GAAGTCCCCC TGACACCCAA TATCAATGCT
TATTCCTTCG CGACATTTGG TGTCAGAGAC ACAGTCATCG GCAATAATTT CCGGCGTCCT
AACACAAATG CCGATTTCGA TGCTTTATTT CCCGGGGGCT ATTATCCTTT GAACAATACG
CATGAATATG ATTTGCAATT CAACGCCGGG TTCAAAGGAA GACTTTACGA TTGGGACTAC
AATCTCGGCA CATCCTACGG CATCAACCAC AACAAACAAT ATAGCGACTT CACGATCAAT
CCGTCACTCG GCCCCACGGG ACCGACTCAG TTCAAGGATC TCGCCACTTA TCAGTTTTCG
CAGCAGGTCA CGCACCTCGA CCTCAACCAC GCCTTCGCAA CCTCGACCCT ACCCAAACCG
ATTGAACTCG GTCTCGGCTT TGAACATCGC ATCGAACGGT TTTCGACTCT TCCGGGCGAT
CCACTCGGCT ATATGAATGG TGGCTACCGA TACCAACCCG GCGATCAGGC CCTTTCGCAT
GATCCCAATC TCGGCAGCTA TGCCGCAGTC GGCGCACAAG GCGCCGTTAC CATCAACCCA
GCGAATGCAA CGTCGATCCT CCGAAATGTC GTCGCCGGCT ATGGCTCGCT CGGGATCTAT
CCAGTTGATA ATTTCTACAT CAACGGCTCG CTGCGTGGCG AGGGTTACGA TGATTTGCCG
AATTTCATTT ACAGCACCAA GCTCACCGCA CGCTGGGATA TCGCACCGGA CTTCGCGATA
CGCGGCTCGC TCGGCACCGG ACAACGCGCC CCTTCCCTGA CCCAGATCGG CTACGCGCAG
ACCGACAGCC GCACCAATAT CGATCCCGTG ACGGGTCTGA TCGTTCCGAG TCTTTCCACC
CTCGCCCGTA ATACATCGGC GCTGGCACGA GCGCTTGGTG CCCAGACCTT GACACCGGAG
AAGTCAACGA ATTTCGGACT TGGTTTCGTG TGGAAACTAC AGGAAAATAG AAATATCACG
CTCGATGGTT ATCGCATCGA CTTGCGTAAC CGGATCTTCC GGACCAATTA CATCTATGGT
TCCGCCGTCG ACCCTCTTAT CGTCGCCAAT GGCGGCAGCG CCGGCACATG GATTCAATAT
TTCGCCAATG GTGTCAATAC GAGCACAACG GGTATCGATC TCGTCGGCGA GGATACAGAG
GACTACGGAG ATTACGGCTC CGTTCGCTAC ACACTCGGAT TCAACTGGAA TCTAAATGTC
ATCGACAGCG TCGCTCAAAC CCCAGCTGCT TTGACCGCGC TTGCTTCCGC GAACAAGGGC
GGCAGCCTGA TCTGGTTCGG CCGCGCGACC GCCGCCGATC TAACGGTCAA CCAACCTCGC
ACCAAATTGA TGTTTGCCGT CAATTGGTCG ATCGGCGATT TCATCGTCAG TGCCACGACG
ACACGTTATG GCTCCTATCA ATATATTCAA AGCCAGCTCC CATCGCAGGA CCGTTCCTTC
GGCGCGAAAT GGATCACCGA TCTCGATGTG ACCTACAAAA TCGCGGGAGG TTTACGAATT
TCGGCTGGCG CCACCAATCT CTTCAATATC CGTCCGAGCG CAAACGGAAT TATCGATGCG
AATACCGGCG CATCCGGCTT CGCTTACGGG AATTCGCCTT TCTCACCGGC CGGCGGATTT
TATTATACCC GGCTCGCTTA TGATTTTTAG
|
|---|
| Protein sequence | MAKQKLLMGS AHTFSVFTLI LGASGHSLEA QESPTSDQVQ ASAVVQDVVV TGGGWERPRS
DQRVILDSPS PIDVISAQQL HQTGRAELSE AITKLLPAFN FGNTTAGVNS IVRPVTNHGL
GPAYTLVLVN GQRRHNSALL TNGGGDTSGV NPVDIDMIPL SAVDHIEVLR DASAAPYGSD
AVAGAINIIL KSSDHGGHAA ALAGNLYQGN PGSDRSTAKG EADAGFKLGD EGGFVHISAD
VRKRGMDWWN FYAKNLPYSP ASNPLNATWT GDGAHNGDPE IRAYNLAYNA EVPLTPNINA
YSFATFGVRD TVIGNNFRRP NTNADFDALF PGGYYPLNNT HEYDLQFNAG FKGRLYDWDY
NLGTSYGINH NKQYSDFTIN PSLGPTGPTQ FKDLATYQFS QQVTHLDLNH AFATSTLPKP
IELGLGFEHR IERFSTLPGD PLGYMNGGYR YQPGDQALSH DPNLGSYAAV GAQGAVTINP
ANATSILRNV VAGYGSLGIY PVDNFYINGS LRGEGYDDLP NFIYSTKLTA RWDIAPDFAI
RGSLGTGQRA PSLTQIGYAQ TDSRTNIDPV TGLIVPSLST LARNTSALAR ALGAQTLTPE
KSTNFGLGFV WKLQENRNIT LDGYRIDLRN RIFRTNYIYG SAVDPLIVAN GGSAGTWIQY
FANGVNTSTT GIDLVGEDTE DYGDYGSVRY TLGFNWNLNV IDSVAQTPAA LTALASANKG
GSLIWFGRAT AADLTVNQPR TKLMFAVNWS IGDFIVSATT TRYGSYQYIQ SQLPSQDRSF
GAKWITDLDV TYKIAGGLRI SAGATNLFNI RPSANGIIDA NTGASGFAYG NSPFSPAGGF
YYTRLAYDF
|
|---|
| |