Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2024 |
Symbol | |
ID | 6200474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2313243 |
End bp | 2314820 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641706011 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001833135 |
Protein GI | 182678989 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0689129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGATA GAAAAAGCCT CACTCCGGCA ATATTTGCCA TTGTCTCTCT CAGCACTGGC CTCGGTGGTT GTCTCTCTGT CGGTCCCGAT TATGTGGGGC CGGACCCGAT GCTTCCCGCG AAGTCCTTTT ACGGGCCACC GGAACCGGCA GCGGCGGTCG CGGCCTTGCC ATCGCAAGGA CCGGCCAAGG GGCCGGTGTC GCCAGTCGAT CCTCTCTGGT GGCGCACGTT CCGAGACCCC ACTTTGACGT CGCTTGTACA AAGAGCAGCG GGTGCCAATC TGGACGTTCG TACAGCCTCG ATGCGCTTGG CACAGAGTCG CTTTGAACGT GGTGTTACGG CTGCGGCCGC ATTGCCGACC GGCAATGGCA ATGCAAGTTA TAATCGTCAG CAAATCAGTA ATCAGGGTGT TGTCACTCTG GTTAATCCGC TCGTCCAACA ACTCGGCGTC GGTGCGTTTA CCGTGCCGCC AATCAATGTC TGGTCGCCGA CATTCGATGC ATCCTGGGAA CTCGATATCT GGGGCCATGT ACGCCGGCAG ATTGAAGCAG CAGATGCGCA AATGGATGCC GCCGAAGAAC AACGCCGCGC CATGCTTGTC TCGACCATGG CGGAACTCGC GCGTGACTAC ATTCAATTGC GCGGGGTTCA GGCGCAGATT GGCATCCTCA AAGACAATAT CGTGAGTTCC GAGGATATTC TGAAACTGAC CCGGACCCGG GCCGAGAAAG GCATGACAAC AGGCCTTGAT GTCGAGAATG CTGCCGCACA GGTCGAAAGC GAGAAAGCGC AATTGCCGAG CCTTGAGGAT CAGCAAATAG AGCTCATCAA TGCTCTAAGC CTATTGCTGG ATAGCCCCCC TGGGGCCCTC AATGATGAGC TCATCAAATC GAAGCCCATC CCTCCCGTGC CCCCACAGGT TCCGCTGGGC ATTCCTTCCG AACTCGCTCG CCGGCGCCCG GATATTCGGC AGGCCGAAGC GCAACTCCAT TCAGCGACCG CCAATATTGG CGTCGCGGTG GCGGAATTCT ATCCAACTGT CAAACTGAAT GGCAGCGTGG GTGCCAATGC CCTCGATTTC AAGAATTTGT GGAAGCCGAG TGCATTGCAA TATAATTTTG GGCCGAGCTT TGCTGTTCCG CTCTTCGACG GCGGCCGGTT GAAAGCGACT CTGCACTTGC GTGAGGCTCA GCAGCAGGAA GCGGCGATCG CCTACCATAA GACCGTGCTC GGTGCCTGGC ATGAGGTGGT CAATACATTG ACTGCTTATC AGAAAGAGCA GCAAAGGCGG GCGAGGCTCA ACGCGCAGGT CGATCATGCG CGCCAAGTGC TTTCGCTCTC ACGCACACGC TATAATACAG GCGTCACCGA TTTCATTACC GTGCTCGACG CGGAACGCAC GCTTCTTGGA GCGCAGCAGC AATATGCGCA GAGCACGACC AATGTCTCGA CCGATCTCGT TGCCCTTTAC AAAGCACTCG GGGGTGGCTG GGAAATGGTG TTTCCCGACA AGGATGCACC AACTCTGGCT ACGCCCGAGA TGACCGCTTC GGTGGCGCCG GCTCCAGCGG CCCAATAG
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Protein sequence | MADRKSLTPA IFAIVSLSTG LGGCLSVGPD YVGPDPMLPA KSFYGPPEPA AAVAALPSQG PAKGPVSPVD PLWWRTFRDP TLTSLVQRAA GANLDVRTAS MRLAQSRFER GVTAAAALPT GNGNASYNRQ QISNQGVVTL VNPLVQQLGV GAFTVPPINV WSPTFDASWE LDIWGHVRRQ IEAADAQMDA AEEQRRAMLV STMAELARDY IQLRGVQAQI GILKDNIVSS EDILKLTRTR AEKGMTTGLD VENAAAQVES EKAQLPSLED QQIELINALS LLLDSPPGAL NDELIKSKPI PPVPPQVPLG IPSELARRRP DIRQAEAQLH SATANIGVAV AEFYPTVKLN GSVGANALDF KNLWKPSALQ YNFGPSFAVP LFDGGRLKAT LHLREAQQQE AAIAYHKTVL GAWHEVVNTL TAYQKEQQRR ARLNAQVDHA RQVLSLSRTR YNTGVTDFIT VLDAERTLLG AQQQYAQSTT NVSTDLVALY KALGGGWEMV FPDKDAPTLA TPEMTASVAP APAAQ
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