Gene Bind_2022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2022 
Symbol 
ID6198807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2311418 
End bp2312176 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content56% 
IMG OID641706009 
Producthypothetical protein 
Protein accessionYP_001833133 
Protein GI182678987 
COG category[S] Function unknown 
COG ID[COG2135] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00187393 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGGGC GTTTTGCCAT AAATTCGAGC CCCGACGCCA TGCGCGAGTT CTTTGGCTAT 
GATGAAGCGT TGGATTTCCC GCCACGCTAT AATATTGCGC CGAGCTTGCC CGTGCCAGTC
ATCAGGGCCG AACGTCGGGG TCGCGCCGCG CCCACGCGGC ATGTTTTGCT GATGCGTTGG
GGATTCCTAC CGGGTTTCGT CAAGGATCCG AAACAATATC CATTGGTTTT TAACGCCCGT
AGCGAAAGCC TGTTCAGCAA GGCAAGTTTC AAAAATGCCA TGCGAAGGCG GCGTTGCCTC
TTCATGGCCG ATGCTTTTTA CGAATGGCGT CATGAGGTGA AAGGCAAGCC AGGCCGGCCC
TATTTGTTGC ATCGGCGCGA TAGAGAACCT CTTGCCTTTG CCGGTCTTTG GGAAACTTGG
ATGGGACCGC ATGGCGAGGA ATTGGATACC GCCTGTATTG TAACCACGGC GGCGAATGGA
GCGACCGCCG CTTTGCATCC GCGGCTTCCT GCGATCATCG AGAAAAAGCA TTTCGATCTT
TGGCTCGATC TGGATGAGAC CAGCACCGAG AAAGCCTATG GCCTGTTGCA CCCGCCCGAA
AACGATGTTC TCGATTTTTA TGAAATCGGG CTCGCCGTGA ACAAAGCGGG ACATGACGCG
GCTGATATTC AGGTCAGGGT CACGCCGGAA GAGCGCCGCG CGCGCGAACA ATCCGTTTCC
GAGCTGCCGA ACGAGCCCGT GCAGGGAAGC CTCTTTTGA
 
Protein sequence
MCGRFAINSS PDAMREFFGY DEALDFPPRY NIAPSLPVPV IRAERRGRAA PTRHVLLMRW 
GFLPGFVKDP KQYPLVFNAR SESLFSKASF KNAMRRRRCL FMADAFYEWR HEVKGKPGRP
YLLHRRDREP LAFAGLWETW MGPHGEELDT ACIVTTAANG ATAALHPRLP AIIEKKHFDL
WLDLDETSTE KAYGLLHPPE NDVLDFYEIG LAVNKAGHDA ADIQVRVTPE ERRAREQSVS
ELPNEPVQGS LF