Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_2020 |
Symbol | |
ID | 6201344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 2307626 |
End bp | 2309266 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641706007 |
Product | levanase |
Protein accession | YP_001833131 |
Protein GI | 182678985 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1621] Beta-fructosidases (levanase/invertase) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0275003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.946482 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGTATA AATATCCTCA TCTAACGACT GGATTAGGGG GCTTACTGGC CCGCTTATTC GCCACATTCG TGATTTCATC TGCGATAGAG CTTGGTTCGT TCGGTCTGTT GCATGCCGAG GAGACAGGCA CGGTCCAGTG GCGTCCGGCC TTGCATTACA CGCCCGAACG GAACTGGATG AACGATCCAA ACGGATTGGT ATTCAATAAC GGCCTTTATC ATTTGTTCTA CCAATATAAC CCCAAAGGAA ATGTCTGGGG TAATATGTCA TGGGGACATG CAACCAGCCC TGATCTGATT CATTGGAATG AACATGATGT GGCGATGTCG GCAAACGAGA CCGAAGAGAT TTTCTCCGGC TCAATCGTCG TCGACGAACA CAATACATCC AGATTAGGCT CGGCGAATTC ATCCCCTCTC ATCGCACTTT ATACGAGTGC GTATAAGGCT GGGTCGGGTC ACCCCGCAGG AACTCAGGCA CAATCGCTTG CCTACAGCCA AGACGAAGCG CAAACGTGGC ATCCGTATGA TCATAATCCC GTATTGACTC TTAGCCCGGA GTCAAAAAAC TTTCGAGATC CAAAAATTTC CTGGTATCCG AAAGGAGGTT ATTGGCTGCT GACAACTGTT GTCGCGGATG CGCAAGTCGT TAAAATCTAT CGCTCCAATA ATCTGCTCAA CTGGGAATTC CTCAGTGATT TCAGTCTCCC TGGTATCCCT CATCAGGGTG CGCTTTGGGA AATGTCCGAT CTTTTCCCTC TTCCTCTTGA CGGCGATAAA AACGATCAAA AGTGGGTTAT GATTGTCAAT GTCAACCCTT GGTCAATCGC GGGAGGATCC GGCGCGCTTT ATTTCGTCGG AGGTTTCGAT GGCAAGGTGT TTGTTCCTGA GCATCTTCCT CCGGCAGGCT CGGACCCTTC CCAATATTTG TGGCTCGACC ACGGCGCCGA CTTTTATGCG GCTGGAACAT TTGCCCATGA GCCCCATGGC AAAGCGGTGA TCATGGGCTG GATGAGCAAT TGGGATTATG CGGAGCATGT CCCGACGGCA CCATGGAAAG GGGCAATGGC CCTGCCGCGT GTGCTCGCGT TGAAAACAAT CGATGGTATC CCGCAACTCG TCTTTTCTCC CGTCGATCAA TATACATCCC TAGTCCAGGG ACAGCCGGCG GCGAGAATTG AGACTCTGAC CGTCTCCTCG TCAATCAAGG AACTTGACCC GTCCACGCAA GGAACCGTGC AGAATATCGC GGTTACCATC CATCCCGGCG CCGCTCAACG TGCTGGGCTC ATCATACGCG GTTCAGCAAA GGGTGATGTG GGGACGCGGA TTTTTTATGA CACATCCAAC CACACATTGA CACTCGATCG TTCCCAATCT GGCGAAACGA ACTTTTCAAG TGCATTCAGT AAACAACATA TTGTCAACTT GCCGCTAGAG AATGGGGAAC TGCGTCTCAC AATCATTGTG GATAGGAATT CGGTCGAGGT TTTCGCCAAC AATGGCCGCG CAGTCATCAC GGATCTCATT TTTCCGACTC TTGATGACAA TCGCATCTCT GTCTTCGCGG AGCATGGCGA TGCGACATTC AATGACCTCG CCATTACCAA TCTCTCCGAT CTGACTAATA TAAAGCAGTA A
|
Protein sequence | MLYKYPHLTT GLGGLLARLF ATFVISSAIE LGSFGLLHAE ETGTVQWRPA LHYTPERNWM NDPNGLVFNN GLYHLFYQYN PKGNVWGNMS WGHATSPDLI HWNEHDVAMS ANETEEIFSG SIVVDEHNTS RLGSANSSPL IALYTSAYKA GSGHPAGTQA QSLAYSQDEA QTWHPYDHNP VLTLSPESKN FRDPKISWYP KGGYWLLTTV VADAQVVKIY RSNNLLNWEF LSDFSLPGIP HQGALWEMSD LFPLPLDGDK NDQKWVMIVN VNPWSIAGGS GALYFVGGFD GKVFVPEHLP PAGSDPSQYL WLDHGADFYA AGTFAHEPHG KAVIMGWMSN WDYAEHVPTA PWKGAMALPR VLALKTIDGI PQLVFSPVDQ YTSLVQGQPA ARIETLTVSS SIKELDPSTQ GTVQNIAVTI HPGAAQRAGL IIRGSAKGDV GTRIFYDTSN HTLTLDRSQS GETNFSSAFS KQHIVNLPLE NGELRLTIIV DRNSVEVFAN NGRAVITDLI FPTLDDNRIS VFAEHGDATF NDLAITNLSD LTNIKQ
|
| |