Gene Bind_2001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_2001 
Symbol 
ID6198703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2286800 
End bp2287222 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content45% 
IMG OID641705989 
Producthypothetical protein 
Protein accessionYP_001833113 
Protein GI182678967 
COG category[S] Function unknown 
COG ID[COG4933] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000301137 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.09388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTCT TATTATCGAT TAAGCCGGAT CATGTTGCAA ATATAATGTC CGGCAAGAAG 
GTATTCGAAT TTCGGCGGAA AGTCTTTGCC CGACGAGATG TTCGGGTAGC AATTATATAT
TGTACAATGC CCGTTGGTAG AATAGTCGGA GAGTTCGATA TCGTGGATAT TATCAGGGAT
TCTCCAGATA GGCTGTGGGA GCGAAGCCAA TGGGGCTCTG GCATATCAAG GGAATACTTT
GACTCGTATT TCGACGGATG CAAAGATGCG TATGCTCTTC AGATTGGGAA TGTTCGAGAA
TTTGAGCCGC ACATTAATCC GTCTGATCTG GTTGATAAGT TCACGCCACC ACAGTCCTAT
ATGTACATAG GCGAGGATAG AAAGCGTGAT ATGGCTACAC AGCTAGAGTT ACTTTGGTCG
TGA
 
Protein sequence
MRVLLSIKPD HVANIMSGKK VFEFRRKVFA RRDVRVAIIY CTMPVGRIVG EFDIVDIIRD 
SPDRLWERSQ WGSGISREYF DSYFDGCKDA YALQIGNVRE FEPHINPSDL VDKFTPPQSY
MYIGEDRKRD MATQLELLWS