Gene Bind_1996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1996 
Symbol 
ID6199589 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2283058 
End bp2283780 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content62% 
IMG OID641705984 
ProductMgtC/SapB transporter 
Protein accessionYP_001833108 
Protein GI182678962 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.03442 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0396859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTCA TTCAAACCTT TGAGCTCGCA CCCTTTCTGG ATTCCTTCGT CAGCTTGTTT 
TCGGCTTTTG TGCTCGGCAC GGCGATCGGC GCTGAGCGGC AATATCGCCA GCGTGTGCCG
GGCTTGCGCA CCAATGTTCT CGTCGCTGTC GGCGCAGCCG CCTTTGTCGA TCTCGCGGCG
CGGATCGGCG GCACGGAGGG AGCGGTCCGC GTCATCGCTT ATGTAGTCTC CGGCGTCGGT
TTCCTCGGCG CTGGCACGAT CATGAAGGAG GGCGCCAATG TCCGCGGGCT CAATACGGCG
GCGACGCTCT GGGCCTCGGC CGCGGTCGGA GCCTGCGCCG GCGCCGACAT GGTCGCCGAA
GCCGTGATGG TGACGATATT CATTCTCATG GGCAATACGC TGCTGCGGCC GGTGGTCAAT
CTCATCAACA GCCGGCCGCT CGACACGATT GCATCAGAAG GCGAATTCAC CGTTCGCGTC
ACGGTGAACG ACGAAGCGGT GCCCACTGTC CGCAATCAGC TCACACGTCA ATTATCCACC
GCCAATCTGC CGATCAGCGA GATCGAGACC GAGGAAGTCT CGGATACGGT AACGGATCTG
GTGGCCACGC TCGTTGCCAC GTCGATCGAT GCCAAGGCGC TCGACGCGGC ACTCGCCAAT
CTCCGCACAC AACCAGACGT GCGCCATGCG AGCTGGGAAA TGAATACAGC CGGGTCGGAA
TAA
 
Protein sequence
MRFIQTFELA PFLDSFVSLF SAFVLGTAIG AERQYRQRVP GLRTNVLVAV GAAAFVDLAA 
RIGGTEGAVR VIAYVVSGVG FLGAGTIMKE GANVRGLNTA ATLWASAAVG ACAGADMVAE
AVMVTIFILM GNTLLRPVVN LINSRPLDTI ASEGEFTVRV TVNDEAVPTV RNQLTRQLST
ANLPISEIET EEVSDTVTDL VATLVATSID AKALDAALAN LRTQPDVRHA SWEMNTAGSE