Gene Bind_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1948 
Symbol 
ID6201281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2220503 
End bp2221693 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content60% 
IMG OID641705936 
Productelongation factor Tu 
Protein accessionYP_001833060 
Protein GI182678914 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCAAGG AAAAATTTGA GCGGACGAAG CCGCATTGCA ACATTGGAAC GATTGGCCAT 
GTTGACCATG GCAAGACGTC ACTGACGGCG GCGATCACCA AGGTTCTGGC GGAAGCGGGC
GGCGCGACCT TTACGGCCTA TGATCAGATC GACAAGGCGC CGGAAGAGAA GGCGCGCGGC
ATCACGATCT CGACGGCGCA TGTGGAATAT GAGACGCCGA AGCGGCATTA CGCGCATGTG
GACTGCCCCG GCCACGCCGA CTATGTGAAA AACATGATCA CCGGCGCGGC GCAGATGGAC
GGGGCGATCC TGGTGGTTTC GGCGGCCGAT GGCCCGATGC CGCAGACGCG CGAGCATATT
CTTCTGGCGC GCCAGGTCGG TGTTCCGGCG CTGGTCGTGT TCCTGAACAA GGTCGACATG
GTCGATGACG CGGAACTGCT CGAACTCGTC GAGCTGGAAG TGCGCGAGCT TCTGTCGAAA
TATGACTTCC CCGGCGATGA CATTCCGATC ACCAAGGGTT CGGCCCTGTG CGCCTTGGAA
AACCGCAATC CGGAAATCGG TCATGATGCG GTTCTCGCTC TGATGCAGAC GGTGGATGAT
TATATTCCGC AGCCGGAACG TCCGATCGAT CTGCCGTTCC TGATGCCGGT GGAAGACGTG
TTCTCGATCT CAGGCCGCGG TACGGTTGTG ACAGGCCGCG TCGAGCGTGG CGTCATCAAG
GTCGGTGAGG AAATCGAGAT CGTCGGTCTG CGGCCGACGG TGAAGACGAC GGTGACCGGC
GTCGAAATGT TCCGCAAGCT TCTGGACCAG GGTCAGGCGG GCGACAATAT CGGCGCTCTG
CTGCGTGGCA CCAAGCGCGA GGATGTGGAG CGTGGCCAGA TCCTGTGCAA GCCGGGTTCC
GTGAAGCCGC ACACCAAGTT CAAGGCGGAA GCCTATATTC TGACCAAGGA TGAGGGTGGC
CGGCATACGC CGTTCTTCAC CAACTATCGT CCGCAGTTCT ATTTCCGGAC GACCGATGTG
ACGGGCGTCG TGACGCTGCC GGAAGGCACG GAAATGGTGA TGCCTGGCGA TAATGTGACG
ATGGATGTGG AGCTGATCGT TCCGATCGCG ATGGAAGAGA AGCTGCGCTT CGCCATCCGC
GAAGGTGGCC GCACGGTCGG CGCCGGCGTC GTCGCCTCCA TTACCGAGTA A
 
Protein sequence
MGKEKFERTK PHCNIGTIGH VDHGKTSLTA AITKVLAEAG GATFTAYDQI DKAPEEKARG 
ITISTAHVEY ETPKRHYAHV DCPGHADYVK NMITGAAQMD GAILVVSAAD GPMPQTREHI
LLARQVGVPA LVVFLNKVDM VDDAELLELV ELEVRELLSK YDFPGDDIPI TKGSALCALE
NRNPEIGHDA VLALMQTVDD YIPQPERPID LPFLMPVEDV FSISGRGTVV TGRVERGVIK
VGEEIEIVGL RPTVKTTVTG VEMFRKLLDQ GQAGDNIGAL LRGTKREDVE RGQILCKPGS
VKPHTKFKAE AYILTKDEGG RHTPFFTNYR PQFYFRTTDV TGVVTLPEGT EMVMPGDNVT
MDVELIVPIA MEEKLRFAIR EGGRTVGAGV VASITE