| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1945 |
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| Symbol | |
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| ID | 6200763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 2215119 |
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| End bp | 2217605 |
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| Gene Length | 2487 bp |
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| Protein Length | 828 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641705933 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001833057 |
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| Protein GI | 182678911 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGGCGCA GGCAAGGTCA ATCTTCAACG AGAGCAGCAC GCCGCAGGCG ATCGGTTGTT
GAGCCGATAT CATCGTCCAA GGAAATACCA CCGCCCAGCG CGGCCGTCGG CGTGCTCACG
AAGCGCATGG TCTGGATCGG CGTGGTCCTG TCCGCTTTGC TCGTTGCGAT CTGCGGCCTC
GCTTTTCAAT ATTTCAAAAG TCCGGGCGGT ACGGATCAGG GCCTCACACC AGGGCTCCTG
ACAGCGCTCA CTTTCGTCGG CAGTGAGACT TGCGCCACCT GCCACCAGAC GGAGGCGCAA
TCCTGGAAGA TGTCGCAGCA CCAACATGCT ATGGCGCATG CGACTGACGC GACAGTGCTC
GGCGATTTCG CCAATGCGAG CTTCGATTAT TTCGGGATAC ATTCGCGCTT CTTTCACAAG
GACGACAAGT TTCTCGTCGA AACCGATGGG CCTGATGGAA AGCTTGCGAC TTTTGAAGTC
AAATATACCT TCGGCATCGA CCCGCTGCAG CAATATCTCG TGGAATTTCC CGATGGACGG
CTCCAGGCTT TGTCGATCGC GTGGGATACG CGGCCGGAAG AGAAGGGCGG CCAGCGCTGG
TTCCATCTCT ATCCAGACGA AGGGATCCGA CATGACGATG TTCTGCATTG GACCAAGTTG
AATCAGAACT GGAACTTCAT GTGCGCCGAA TGCCATTCGA CAGATGTGCA CAAGAATTAT
GACGCTGTGC ATGATCGCTT TGCCACGCAT TTTGCCGAGA TCAGCGTCGG TTGCGAGGCG
TGCCATGGCC AGGGCTCTCG CCATGTTACC TGGGCGCGAG AAAAGCAAAG CTGGTGGCCG
TTTGCAAAAC AGAATGACCC GACCAAAGGG TTTCTGGTGA GCTTTGACGA GCGAGCTGGC
GTGACGTGGT CACCCGATCC CGCGACTGGT CTACCTCGCC GGAGCGCTGC ACCTGCGACC
TTGCGCAAGG AAGTTGAGAC CTGCGGCCTC TGTCACGCGC GACGCAGCGC ATTTTCTGAA
GACTGGGTGC CTGGCCGATG GCTTTCTGAC ACGCATGGGG TCTCCCTGCT TAGCCGTGGC
CTCTTTGAGG CCGACGGGCA GATGCGTGAT GAGGTTTATA ATTATGGGGC GTTCAAGCAG
AGCAAGATGT TCGCGGCGGG CGTCACATGC AGCGATTGTC ATGAGCCGCA TGGCGCGAAA
CTCCGGATTC CTGGCAACGG CGTCTGCCTG CAATGTCATG CCACTGACCG ATATGAAACC
GTGGCGCATC ATCATCATCA TTATGACGGG GCAACGCCCG CGCTTGCCTG CACATCATGT
CATATGCCAC AGCGAACCTA TATGGTCATC GACCAGCGGC ATGATCACAG TTTCCGAATT
CCGAGACCGG ATCTGTCCGC AAAGCTCGGC ACGCCGAACG CTTGCAATGG TTGTCATACT
GGTAAACCGC CCGAATGGGC AGCGTCGGCG ATCGAGCAAT GGTATGGACC CGACCGCAAA
GGGTTCCAAA ATTATGCTGC TGCTTTCCAT TCCTCATGGA CTGACATGCC GGATGCGGCA
GTCCGGCTTG CTGCCGTCGC CGGAGATCGT GGTGCACCGG CCCTTGCCCG AGCGAGTGCT
TTGACCGAGC TTGGTGGACA CGTCACGCCA TCGAATTTTG TCCTGGCCAG AAATGGCCTC
AGCGATCCAG ATCCGACAGT GCGGATTGCG GCGCTCGATA TGCTGCAAGG CCTGCCCGGA
CTTCAAATCT GGCCTCTCGT TTCAACGCTT CTTTCCGATG AGAGCTTGGG TGTGCGGATA
AGGGCCGCCG CACTGCTGGC CTCGGTGCCG ACGGCGAGCC AGCCGCCTGC CGACCGCGAG
CGTTTCGAGC GCGCTGCTGC TGAATTCATT GCCGCACAGC GTTTGAATGA CGATCGGCCC
GAGGCTCGCA GCATGCTCGC CAGCTTCCTT GTCCAGCGCA ATCGCTTTCC TGAAGCGGAA
ATCGAATATA GGGCTGCTTT GCACCTCAGC GCAGCCTATA CGACGGCAGC AATCAATCTC
GCCGACCTTT ATCGGCATCT TGGGCGCGAA ACTGCAGGAG AGGCGGTGCT GCGGGAAGCC
ATTGCAGCCT CGCCGAAGGA TGCAGGCGTT CATCATGCGC TGGGGCTGAC GCTGGTACGC
CTGAAGCGCC AGAATGAGGC GCTCACCGAG CTTCGTCAGG CGGCGGAACT TGCCCCCGAT
CAAGCCCGAT TTGCCTATGT CTATGCGGTC GCATTGCATG GGATGGATCG CGGCGATGAA
GCGCTCGGCA CTGTCAAGAC AGCTTTGGCG CGGCATCCCA ATGACCATGG ACTTTTGTCA
GCGGCGGTCA CTTTCTCTCG AAACGCCGGA GACATTCCAA TGGCGCTTCG CTATGCCGAG
CAACTTGCGC AATTGTCTCC GGAGGATCGC GATCTCGCCT CTCTCGTTAT GGCATTGAGA
CAGCAGCTCA ACGCGCCCAT AAAATGA
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| Protein sequence | MGRRQGQSST RAARRRRSVV EPISSSKEIP PPSAAVGVLT KRMVWIGVVL SALLVAICGL
AFQYFKSPGG TDQGLTPGLL TALTFVGSET CATCHQTEAQ SWKMSQHQHA MAHATDATVL
GDFANASFDY FGIHSRFFHK DDKFLVETDG PDGKLATFEV KYTFGIDPLQ QYLVEFPDGR
LQALSIAWDT RPEEKGGQRW FHLYPDEGIR HDDVLHWTKL NQNWNFMCAE CHSTDVHKNY
DAVHDRFATH FAEISVGCEA CHGQGSRHVT WAREKQSWWP FAKQNDPTKG FLVSFDERAG
VTWSPDPATG LPRRSAAPAT LRKEVETCGL CHARRSAFSE DWVPGRWLSD THGVSLLSRG
LFEADGQMRD EVYNYGAFKQ SKMFAAGVTC SDCHEPHGAK LRIPGNGVCL QCHATDRYET
VAHHHHHYDG ATPALACTSC HMPQRTYMVI DQRHDHSFRI PRPDLSAKLG TPNACNGCHT
GKPPEWAASA IEQWYGPDRK GFQNYAAAFH SSWTDMPDAA VRLAAVAGDR GAPALARASA
LTELGGHVTP SNFVLARNGL SDPDPTVRIA ALDMLQGLPG LQIWPLVSTL LSDESLGVRI
RAAALLASVP TASQPPADRE RFERAAAEFI AAQRLNDDRP EARSMLASFL VQRNRFPEAE
IEYRAALHLS AAYTTAAINL ADLYRHLGRE TAGEAVLREA IAASPKDAGV HHALGLTLVR
LKRQNEALTE LRQAAELAPD QARFAYVYAV ALHGMDRGDE ALGTVKTALA RHPNDHGLLS
AAVTFSRNAG DIPMALRYAE QLAQLSPEDR DLASLVMALR QQLNAPIK
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