| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1877 |
|---|
| Symbol | |
|---|
| ID | 6201083 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 2140541 |
|---|
| End bp | 2142028 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641705865 |
|---|
| Product | glutamyl-tRNA(Gln) amidotransferase, B subunit |
|---|
| Protein accession | YP_001832990 |
|---|
| Protein GI | 182678844 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
|---|
| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.576524 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACAC ATGTCAAACC TTCCAAGCTC ATCAAGGGCG CGACCGGCGA TTGGGAAATC
ATCATTGGTC TTGAAGTCCA TGCCCAGGTG ACATCGCGAT CCAAACTCTT TTCCGGTGCC
TCCACGCAAT TCGGAGCCGA GCCGAACAGC AATGTTTCGC TCGTCGATGC CGCCATGCCG
GGCATGCTGC CGGTCATCAA CGAGGAATGC GTGGCGCAGG CCGTGCGCAC GGGTCTCGGC
CTCAAGGCTC AGATCAATCT GCGTTCTGTC TTCGATCGGA AGAACTATTT CTATCCCGAT
CTGCCGCAGG GCTATCAGAT CTCCCAGTAC AAGAGCCCTA TCGTCGGCGA GGGCATCGTG
ATTGTCGATG TGTCGCCGAC CGAACAGATC GAGGTCGGGA TCGAGCGTCT GCATCTCGAA
CAGGATGCCG GCAAATCACT GCACGACCAA TCAGCGACGG ATTCCTTCGT CGATCTCAAC
CGGTCGGGTG TGGCCTTGAT GGAGATCGTG TCCAAACCCG ACATGCGATC CGCCGACGAG
GCGCGCGCTT ATGTCAGCAA GCTGCGCACC ATCCTGCGCT ATCTTGGCAC GTGCGACGGC
AATATGGAGC AGGGCTCACT GCGCGCCGAC GTCAATGTGT CGGTCCGCCG GCCGGGCGAG
CCGTTCGGCA CGCGCTGCGA GATCAAGAAC GTCAATTCGA TCCGTTTCAT CGGCCAGGCG
ATCGAGACGG AAGCCCGCCG GCAGATCGGT ATCCTCGAGG ATGGCGGCGT GATCGATCAG
GAGACGCGCT TGTTCGATCC GGGCAAGGGC GAGACGCGCT CGATGCGTTC GAAGGAAGAA
GCGCATGACT ATCGCTACTT CCCTGATCCC GATCTGTTGC CGCTCGAATT CGATCAGGCC
TATGTCGATG GGCTGGCCTC CGCGCTGCCG GAATTGCCGG ATGCGAAGAA GGCTCGCTTC
ATGAACGATT ACGGGCTGCC GGCCTATGAC GCGGGCGTGC TCGTCGCCGA CAAGGAGACG
GCCGATTATT ATGAGACGAC CGTCAATTAT AACGGCGTGA AACGCGATCC CAAGCTCGTC
GCCAATTGGG TGACGGGCGA TGTGGCGGCC TATGCCAATT CGGTCGGGCT GCCGGTTTCG
CAAACCCATC TTACACCAGC GCAGATCGCC ACATTGGTCG ATCTCATCAG CGAAGAAGTG
ATCTCGGGCA AGATCGCGAA GGATGTGCTG GCGATCCTGA TCAATGAGGA CAAGGCGGGT
GATCCACGCA CTATCGTCGA GGCACGTGGC CTGAAACAGG TCACGGATAC GGGTGCTATT
GAAGCAGCCG TGGATGCGAT CATCGCCGCC AATCCAGACA AGGTGGCGCA GGCGCAGGCC
AAGCCCACAA TGCTCGGCTG GTTCGTGGGG CAGGTGATGA AACAGACCGG CGGCAAAGCC
AACCCGCAAG CCGTCAATGA AATACTGAAA GCCAAACTCG GGATCTAA
|
|---|
| Protein sequence | MNTHVKPSKL IKGATGDWEI IIGLEVHAQV TSRSKLFSGA STQFGAEPNS NVSLVDAAMP
GMLPVINEEC VAQAVRTGLG LKAQINLRSV FDRKNYFYPD LPQGYQISQY KSPIVGEGIV
IVDVSPTEQI EVGIERLHLE QDAGKSLHDQ SATDSFVDLN RSGVALMEIV SKPDMRSADE
ARAYVSKLRT ILRYLGTCDG NMEQGSLRAD VNVSVRRPGE PFGTRCEIKN VNSIRFIGQA
IETEARRQIG ILEDGGVIDQ ETRLFDPGKG ETRSMRSKEE AHDYRYFPDP DLLPLEFDQA
YVDGLASALP ELPDAKKARF MNDYGLPAYD AGVLVADKET ADYYETTVNY NGVKRDPKLV
ANWVTGDVAA YANSVGLPVS QTHLTPAQIA TLVDLISEEV ISGKIAKDVL AILINEDKAG
DPRTIVEARG LKQVTDTGAI EAAVDAIIAA NPDKVAQAQA KPTMLGWFVG QVMKQTGGKA
NPQAVNEILK AKLGI
|
|---|
| |