Gene Bind_1813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1813 
Symbol 
ID6200861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp2061806 
End bp2062576 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content60% 
IMG OID641705803 
Producthemolysin A 
Protein accessionYP_001832930 
Protein GI182678784 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.841717 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGCA TGTCAGCAAA TCCGTCGAGG CCTCCCCTTT CTCGCGCCAG GCAACGTGCC 
GATCGCGTGC TGGTGGAGCA TGGTCTTTTC GAGAGCCGAG CCAAGGCGCA GGAAGCCATC
GCGGCTGGGT TGGTGCGTGT CGAGGGCGAA GTTTTGCACA AAGCCTCGCA AATGATCGAT
GCCGACCATT ATATCGAGGC TTCGGCACCC TACCCCTGGG TCTCACGCGG CGGTGTCAAA
CTCGCGGCGG GCATCGAGGC TTTCGGCGTC GATCCCCGCA ACCGCCTCTG CCTCGATATC
GGCGCCTCGA CCGGCGGCTT CACCCATGTG CTTCTAAGCC ATGGAGCCAA GAAGGTCATC
GCCATTGAAG TCGGCCATGG TCAATTGCAC GAGACCATCG CCAAAAATCC GCGTGTCGAC
TCGCGCGAGG GTGTCGATGC CCGAGATCTG CGACCGCAGG ATTTCCCCAT TCTCCCCTCG
CTCATCACCT GTGACGCGAG TTTCATCTCC CTGCACCTGC TGCTGCCCGC CATTCTGGCG
CTGGGTGATG ATGATGCCTT TTTCATCGGC CTGATCAAAC CGCAATTCGA AGCGGGTCGC
GGCCATAAAA GCATTATCAG GGATGGCGCG ATCCATGCGC GGGTTTGTGC AGAGGTCGAG
GAGCATGTTG CTAAACTCGG CTGGCAGAAA GAAGGGATCA TTCCCTCCCC CATTACCGGC
ACCGACGGGA ACCAGGAATT TTTGATCGGG GCGCGACGGA CAAAGGCCTG A
 
Protein sequence
MSGMSANPSR PPLSRARQRA DRVLVEHGLF ESRAKAQEAI AAGLVRVEGE VLHKASQMID 
ADHYIEASAP YPWVSRGGVK LAAGIEAFGV DPRNRLCLDI GASTGGFTHV LLSHGAKKVI
AIEVGHGQLH ETIAKNPRVD SREGVDARDL RPQDFPILPS LITCDASFIS LHLLLPAILA
LGDDDAFFIG LIKPQFEAGR GHKSIIRDGA IHARVCAEVE EHVAKLGWQK EGIIPSPITG
TDGNQEFLIG ARRTKA