Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1761 |
Symbol | |
ID | 6200907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1995529 |
End bp | 1996248 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641705752 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001832880 |
Protein GI | 182678734 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0864645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCACT CCCTCCCGAA AGGATCTACA CTGACCGCGG ACGAAATCCG GTCGGTTTCG CCAGGGCTCG CCCGGTACGC GGAGGAGGAT GGTCTTAAAG GATTGTGGCG GCGGCCTCAA TTGTCGCTCA GGGATCGGAG CATCGTCACG GTCGCGATCC TCATCGCCCG CAATCAGCCG GTGGATCTCC CCAACTACCT CACCGTCGCG TTGGACAATG GCGTAACGCC TGCCGAGATC TCGGAGATTA TCACCCATCT GGCGTTCTAT GCGGGCTGGT CGAATGCAAT GTCTGCGATC TCTATCACCA AGGATATTTT CGCTCAGCGC AGTGTCGGCC CTGATCAGTT GCCGCCTGGC TCGCCGCAAT TGCTTCCTCT CGATGAAGCT GCCGAGGTGC AACGCGCCGC AAGCGTCGAG GCCAATGTTG GTTGGGTCTC GCCCGGGCTG GTTCAATACA CCACCGATCC GCTTTTCAAG GATCTCTGGC TTCGGCCGGG CTTGACGCCG CGTGACCGGA GCCTCGTCAC CGTCAGCGCC CTGATCGCCA ACGGCCAGGC GGCGCAAATC ACCTATCATC TCAACAGAGC TATGAACAAC GGACTGACGC AGGAGCAGGC GGGTGAAGTC ATCACCCAGG CCGCCTTCTA TGCAGGATGG CCCAATGCCT TCTCGGCGGC TTCAGTCGCC GGTGAAGTAT TCAAGAGCCG CTCCAAATAG
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Protein sequence | MSHSLPKGST LTADEIRSVS PGLARYAEED GLKGLWRRPQ LSLRDRSIVT VAILIARNQP VDLPNYLTVA LDNGVTPAEI SEIITHLAFY AGWSNAMSAI SITKDIFAQR SVGPDQLPPG SPQLLPLDEA AEVQRAASVE ANVGWVSPGL VQYTTDPLFK DLWLRPGLTP RDRSLVTVSA LIANGQAAQI TYHLNRAMNN GLTQEQAGEV ITQAAFYAGW PNAFSAASVA GEVFKSRSK
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