Gene Bind_1755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1755 
Symbol 
ID6200795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1986644 
End bp1988965 
Gene Length2322 bp 
Protein Length773 aa 
Translation table11 
GC content57% 
IMG OID641705746 
Product3-hydroxyacyl-CoA dehydrogenase NAD-binding 
Protein accessionYP_001832874 
Protein GI182678728 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.180763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA TCAAAAAAGT TGCCGTCATC GGCGCAGGCG TCATGGGGGC GAGCATTGCC 
GCCCATGTCG CGAATGCGGG CGTGCCTGTG GTTCTGCTCG ACATTGTCGC CAAAGACAAT
CCCAACCGCA GCGCGATTGC CGAAGGCGCT CTGACCAAGC TCCTGAAGGC CGATCCGGCA
CCGTTCATGA GCAAGGCCGC CGCGAAATTC GTGACCACTG GCAATATCGG GGACAATCTC
GATCTGCTGG CCGATTGCGA TTGGATCATC GAGGCCGTGG TCGAGCGTTT GGATATCAAG
CAAAACCTCT ACGCGGCGGT CGAAGCCATA CGCAAGCCAG GCAGTATTGT CTCTTCAAAT
ACTTCGACGA TTCCGCTCAA GGCGCTTGTC AAAGGTATGC CCGCGCGTTT CTCGAAAGAT
TTTATCATCA CGCACTTCTT CAATCCGCCA CGTTACATGC GGCTTCTTGA AGTGGTCGGT
GGCGAGAATT CGCGGGCTGA CGCTATAGAA ACCGTCACAC GGTTTGCCGA TGTCATGCTC
GGCAAAAGCG TGATCTTTTG CAAGGATCGG CCAGGCTTCA TCGCTAATCG TCTGGGTGTG
TTCTGGTTGC AAACCGCCGT CGTCGAGGCG TTGGATCTTG CTCTTGATAT CGAAGAGGTC
GATGCGATCA TCGGTAAGCC GATGGGCATT CCGAAAACCG GTGTTTTCGG TCTCATCGAC
CTCGTCGGTT TGGATCTGAT GCCCCATATC AACGCCAGCC TATCAGCGGC GCTGCCGAAA
GATGATCCAT TTCACGTAGT CAACCAGCCG ATGCCCTTGG TCGAAAAGCT GATTGCCGAG
GGCTATACGG GCCGCAAGGG CAAGGGTGGC TTCTATCGGA TCAACCGTGA GCAGGGTAAG
CAAAAGGAAG CTCTCGACCT CAAGACTGGC ACCTTTCGGC CGGTTCGTAA GCCCGTCGTG
GAGGCGATTG AACAAGGCGG CAGCAAGCTT GATCGTCTGC TTGCGCATGA GAGCGTACAT
GGACGTTATG CATGGCAGGT TCTCAGCCGC ACGCTGGCCT ATGCGGCTGC CTTGGTCGGT
GATGCGACCG ATGACGTGGC GGCGATCGAT GAGGCGATGC GGCTCGGCTA CAATTGGAAA
TATGGTCCCT TTCAACTGAT CGATCAGATC GGCGTCGAGG CGCTGGTCAC GGGTCTCAAC
GCCAGCAAAT TTCCGATCCC GGCTATTTTG CGGATCGCCG AAGGCAGGCC ATTCTATCGC
GTTGAGGATG GCCGCCGTCA GGTCCTGGGT CTCGATGGCA CCTATCATGA TCTCCTGCGG
CCTGAAGGCG TGATCATGTT GGAAGACATC AAATTGAAAT CCAAGCCAGT TCTCAAGAAC
AGCTCGGCGG CCTTGTGGGA TATCGGCGAT GGTGTCGCCT GTTTCGAGTT CACGAGCAAG
ATGAATGCGC TCGACCCCGA TATCATCGAT CTCCTCATGC GTTCGATCCA CTTGGTCGCG
AAGGATTTCA AGGCGCTGGT GATCTACAAC GAGGGCAGCA ACTTTTCCGT CGGTGCCAAT
CTTGGTCTCG CGCTATTCGC CGCCAATATC GCGGCCTGGA AGGATATCGA GAACCTCATC
CTGCAGGGAC AGACGGCTTA CGGCATGTTG AAATATGCGC CGTTTCCGGT TGTTGGCGCG
CCGGCCGGCA TGGCGCTGGG TGGCGGCTGC GAAATTCTTC TGCATTGCGA TGCGATTCAA
GCCCATGCGG AAACCTATAC CGGCCTTGTT GAGGTTGGTG TCGGTCTGAT CCCAGGCTGG
GGTGGCAACA AGGAGATGCT GCAGCGCTGG TTCACATTAG GCCGCCTGCC GAAAGGCCCA
ATGCCCGCGA TCAGCAAGGT CTTCGAGATC ATCAGCACGG CGACCGTTTC CAAATCGGCG
GCCGAGGCCA AGGAGCTTTT GTTCCTGAGG CCGACCGATG CGATCACGAT GAATCGCTAC
CGTCTGCTGG CCGATGCCAA GGCTAAGGCC CTTGCTCTTG TGCCCGATTA CAAACCGCCG
GAGTCGGTCA CTTTTAACCT GCCAGGACCT TCGGCCGCAA CGGCCCTGAA GATGGCCGTC
GACAGCTTTT TCCGCCTTGG TAAGGCGACA GCCTATGACG TCGTTGTGTC CAGTGCATTG
GCCGATGTCT TGTCGGGTGG TGACACGGAC ATCACCGTGC CGACGGATGA AAAGACGCTT
CTCACGTTCG AACGCGAGGC TTTCAGCAAG CTTGCTCGGC AGCCCGGTAC ATTGGCGCGT
ATTGAACACA TGCTGACGAC TGGAAAGCCC TTACGGAATT AA
 
Protein sequence
MTDIKKVAVI GAGVMGASIA AHVANAGVPV VLLDIVAKDN PNRSAIAEGA LTKLLKADPA 
PFMSKAAAKF VTTGNIGDNL DLLADCDWII EAVVERLDIK QNLYAAVEAI RKPGSIVSSN
TSTIPLKALV KGMPARFSKD FIITHFFNPP RYMRLLEVVG GENSRADAIE TVTRFADVML
GKSVIFCKDR PGFIANRLGV FWLQTAVVEA LDLALDIEEV DAIIGKPMGI PKTGVFGLID
LVGLDLMPHI NASLSAALPK DDPFHVVNQP MPLVEKLIAE GYTGRKGKGG FYRINREQGK
QKEALDLKTG TFRPVRKPVV EAIEQGGSKL DRLLAHESVH GRYAWQVLSR TLAYAAALVG
DATDDVAAID EAMRLGYNWK YGPFQLIDQI GVEALVTGLN ASKFPIPAIL RIAEGRPFYR
VEDGRRQVLG LDGTYHDLLR PEGVIMLEDI KLKSKPVLKN SSAALWDIGD GVACFEFTSK
MNALDPDIID LLMRSIHLVA KDFKALVIYN EGSNFSVGAN LGLALFAANI AAWKDIENLI
LQGQTAYGML KYAPFPVVGA PAGMALGGGC EILLHCDAIQ AHAETYTGLV EVGVGLIPGW
GGNKEMLQRW FTLGRLPKGP MPAISKVFEI ISTATVSKSA AEAKELLFLR PTDAITMNRY
RLLADAKAKA LALVPDYKPP ESVTFNLPGP SAATALKMAV DSFFRLGKAT AYDVVVSSAL
ADVLSGGDTD ITVPTDEKTL LTFEREAFSK LARQPGTLAR IEHMLTTGKP LRN