| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1647 |
|---|
| Symbol | |
|---|
| ID | 6201137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1862298 |
|---|
| End bp | 1863161 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641705638 |
|---|
| Product | YdjC family protein |
|---|
| Protein accession | YP_001832767 |
|---|
| Protein GI | 182678621 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.583334 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAAGG CCGGAAATGG CTTTTGCTTC AGTCTCTGCG CCGATGATTA CGCGCTTTCT
CCGGCCGTAA GCCTGGGGAT TCGCGAAGCT TTGACGGCCC GCCGGCTCAG CGCGACGAGC
GTGATGACGA CCATGGCTGG CTGGCACCGG GAGGCACACG ATTTACGGCC TTTTCACCCC
GAGGCGGAGA TTGGCCTGCA TCTCAATTTG ACCTCGGGCA CGCCGCTCGG GGCCATGCCA
TGTTTCGCCC CCACGGGCCG TTTGCCGCCG ATCGGCCGAC TCATCAAGGC CGCCTATGGG
AGAACTTTGC CTGAAGCCGA GATCCGGGCA GAAATTTCGC GTCAGATCGA TGCGTTCATA
GACTCATTCG GGGCCGCACC CGATTATATC GACGGCCATC AGCATGTGCA GGCACTGCCC
GGGATCCGCC TCTGGCTGCT CGAAACGCTC GCGGAAAAGG GATTGACCGG CAAGCTCTGG
CTGCGCGATA GCGGCGACAG CTTGTCTCGT ATCATCATGC GGGGAGGAGA GCTTTCCAAG
GCCTTGATGG TCGCGGGATT CGCGCGCGGT TTCGCAAGGA TGGCGGCGGC GCATGGATTT
GCCTGCAACG AGGGTTTCGC CGGATTTTCC GCTTTCGCCC CCGACGAAAA TTATGGGCAG
GCCTTCGCGC ATTTTCTGAC GGCGCCGGGA AAAAGGCATC TCATCATGTG CCATCCGGGC
CATTGCGACG AGGAATTGGC CGCGCTCGAT CCGGTGACCA CCAGCCGAGA AAAGGAACTG
GCTTTCCTTC TCTCGGATGA TTTCTTGCGC CTGCTCGATC AGCGCAAGGC GCGACTTTCA
CGCCTTGCCA TCATCAGGAA TTAG
|
|---|
| Protein sequence | MPKAGNGFCF SLCADDYALS PAVSLGIREA LTARRLSATS VMTTMAGWHR EAHDLRPFHP
EAEIGLHLNL TSGTPLGAMP CFAPTGRLPP IGRLIKAAYG RTLPEAEIRA EISRQIDAFI
DSFGAAPDYI DGHQHVQALP GIRLWLLETL AEKGLTGKLW LRDSGDSLSR IIMRGGELSK
ALMVAGFARG FARMAAAHGF ACNEGFAGFS AFAPDENYGQ AFAHFLTAPG KRHLIMCHPG
HCDEELAALD PVTTSREKEL AFLLSDDFLR LLDQRKARLS RLAIIRN
|
|---|
| |