Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1627 |
Symbol | |
ID | 6199656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | + |
Start bp | 1837123 |
End bp | 1839279 |
Gene Length | 2157 bp |
Protein Length | 718 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641705618 |
Product | 1A family penicillin-binding protein |
Protein accession | YP_001832747 |
Protein GI | 182678601 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.216077 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCACTT CATGGTTCTC CTGGTTGAGT AAAACTGTCA GGCGCCTGCT CCTGGAGCTT GATGCATGGA TTGATTCCTC TCTTTATGAC GCAAAGATCC GGTCGCGCGA GACTTATCTC GCCTATTCCG CTTTCATGGA ACGGTTTCAC GTCTCCGGCT GGCGGCGTAT CCTGGTGGAA TGTTCCTGCG AAGGCCTGAC GCTCAGCATT GCCGGGGGGC TCTTCGCCCT GTTCCTGGCC ATTCCGGCTT TTCAGGAGAC ATCCGAGGAC TGGCTGAAGA AGCAGGATCT GGCGATCACC TTTCTCGATC GTTCCGGCGC GATCGTCGGC AAGCGCGGGA TCAAACATGA CGATTCCGTC GCCTTCGAGG AACTTCCACC GACCTTGATC CATGCCGTTC TGGCTACCGA GGATCGCCGC TTTTTCGATC ATTTCGGCAT TGACATTGTC GGCACGTTCC GGGCGCTGAC GGTCAATGCG CGCGCGAGCA ATGTCGTCCA GGGCGGCTCC TCAATTACCC AGCAATTGGC GAAAAACCTG TTCCTGTCCA ACCAACGCAC GCTGGAGCGC AAGATCAAGG AAGCCTATCT CGCGCTTTGG CTCGAAACAC ATCTGTCCAA GCGAGAAATC CTGCGTCTCT ATCTCGACCG CGTTTATATG GGTGGCGGCA CTTTTGGCGT GCAGGCAGCA GCGCAATTTT ATTTTGGCAA ATCGGTGCGT GACCTGACGC TTTCGGAATC GGCCATGCTG GCCGGCCTTT TCAAAGCCCC GACCAAATAT GCGCCGCATG TTAATTTGCC GGCGGCACGC GCGCGCGCCA ATGATGTCCT GACAAACATG GTCAATGCCG GCTATCTCGG CGAGGGACAA ATCCATGCGG CGTTGCGCAA TCCGGCCACT CCCGTTGATC GCCGGCGCGA TAACAGCCCG GATTGGTATC TCGATTATGC CTATGACGAG GTGAAGAAAC TGGTTGCGGC GGGCAAGCTT GGCGAGGAAC GGGTTTTGAC CGTTCGTACC GCGCTCGATT CCAATTTGCA GAAACAGGCG GAAACGACGA TCGAGGAACA ATTACGCCAG CGCGGTCCTG ATTATCATGT CAAACAGAGC GCCATGGTCG TGATCGAGCC TTTGGGCGCC CTTCGTGCGA TTGTCGGCGG ACGTGATTAT GGAGCCAGCC AGTTCAATCG CGCGACCGAC GCATTGCGCC AACCGGGTTC ATCCTTCAAA CCCTTCGTGT ATCTGACCGC GCTGATGAGT GGTAAATTCA AACCTTCCAC GATCGTGCTG GATGCGCCCA TCTGCATTGG CAATTGGTGC CCGCGCAATT ATGGCGGCAC CTATGCCGGG CATTTACCTT TAGTGAATGC GCTGGCGCGT TCGCTGAATA CGGTCGCTGT ACGTCTGGCG ACAGCCGTCG GCGATGGGAG CCCGAAAGCG GGACGTGCCA AGATCATCGA TACCGCGCGG CGTATGGGCC TGACGACACC GCTGACGGAT ACAGTTTCGT TGCCAATCGG CGCTGCCGAG GTGACTGTCT TTGATATGGC TTCGGCCTAT ACAACATTCG CCAATGGCGG TTTGCGCGCA CCCGCTTTCG CGGCCATGGA AATCGCCAAT AGCCGAGGCG AAATCATCTA CCGTCACGAT AGCGATGCCC CGGCGCCCGT GCGGATCGTC AACGAGGATA CGGTTATCGA CATGGATTCC ATGCTTTTGC AGGTTGTTCA GGCTGGCACC GGCCGCAAAG CGCAACTCGA GGGCATCGAT GTCGCCGGCA AGACCGGGAC GACCAATGGC TACAAGGATG CCTGGTTCAT CGGTTTCACC GGCAATTATG TCGGCGCGAT CTGGTTCGGC AATGACGATG ACAGTCCGAT GGAGAAGATG ACAGGCGGCT CACTTCCCGC CGCGACTTGG CACGAGATCA TGGCCTATGC CCATCAAGGC ATCGATTTGA AGCCGCTCCC CGGCCGGCCG CAACCCGTGA CACCGGCCGA GACCGTGGCG AAGTCTGGTG AAACCGCCAG CGCGGACAAA ACGCAAATAC GCCCAGCCTT GCTGTCACCA AATGGTATCG AGGTCTTGAA AGCGATAGCC GACACCCTGT CGCAAGGAGA CAAGCAGCGT TTGGCGGCAG GTCCGACGAT ACGATGA
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Protein sequence | MGTSWFSWLS KTVRRLLLEL DAWIDSSLYD AKIRSRETYL AYSAFMERFH VSGWRRILVE CSCEGLTLSI AGGLFALFLA IPAFQETSED WLKKQDLAIT FLDRSGAIVG KRGIKHDDSV AFEELPPTLI HAVLATEDRR FFDHFGIDIV GTFRALTVNA RASNVVQGGS SITQQLAKNL FLSNQRTLER KIKEAYLALW LETHLSKREI LRLYLDRVYM GGGTFGVQAA AQFYFGKSVR DLTLSESAML AGLFKAPTKY APHVNLPAAR ARANDVLTNM VNAGYLGEGQ IHAALRNPAT PVDRRRDNSP DWYLDYAYDE VKKLVAAGKL GEERVLTVRT ALDSNLQKQA ETTIEEQLRQ RGPDYHVKQS AMVVIEPLGA LRAIVGGRDY GASQFNRATD ALRQPGSSFK PFVYLTALMS GKFKPSTIVL DAPICIGNWC PRNYGGTYAG HLPLVNALAR SLNTVAVRLA TAVGDGSPKA GRAKIIDTAR RMGLTTPLTD TVSLPIGAAE VTVFDMASAY TTFANGGLRA PAFAAMEIAN SRGEIIYRHD SDAPAPVRIV NEDTVIDMDS MLLQVVQAGT GRKAQLEGID VAGKTGTTNG YKDAWFIGFT GNYVGAIWFG NDDDSPMEKM TGGSLPAATW HEIMAYAHQG IDLKPLPGRP QPVTPAETVA KSGETASADK TQIRPALLSP NGIEVLKAIA DTLSQGDKQR LAAGPTIR
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