| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1616 |
|---|
| Symbol | |
|---|
| ID | 6200646 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1824776 |
|---|
| End bp | 1826512 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641705606 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001832736 |
|---|
| Protein GI | 182678590 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.294522 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGGCCC GGTTCGTCTC CCTCGCCTTT CTCGATCGCA AAAGTCTGCC AAATCCCTAT
GATTTTGCCG CCTTCATCCT GCTGCTCGCC GCTTTCGTCG CGGTGGCCTA TGGTTCCTCG
GGCCTGACAC TGCCCCTCAG CGCCCCCGAG GCCACGCACA TATCCCTCGA TTATGGCGCC
CTGCCCTATT ATGCGCTGCG CACGACCTTG CGCATGTTCG CCGCCATCGC CGCCTCGCTG
GTTTTCACGT TCACTTATGC GACCCTTGCC GCCAAGAGCC AGCGGGCCGC ACTCGTGCTC
ATCCCGCTGC TCGATATTTT GCAATCGGTG CCGATCCTCG GCTTTCTTTC CTTTACCGTC
ACCTTCTTCC TGCATCTTTT TCCGGGCTCC ACACTCGGAG TCGAATGCGC CGCGGTTTTT
GCGATTTTCA CCTCTCAGGC CTGGAATATG GCCTTTTCCT TCTATCAATC CTTGCGCAGC
CTGCCGCGTG ATCTCGTCGA GGTGGCCAAC GGTTTCCATC TTTCGCCCTG GCAGAAATTC
TGGCAGCTCG AGACACCCTA TGCCATGCCG GCTTTGATCT GGAACACGAT GATGTCCATG
TCGGGCGGCT GGTTTTTCGT CGTCGCCTCG GAGGCAATCT CGGTCGGGGA CACGACGGTC
AAACTCCCTG GCATCGGCTC CTATCTCGCT CAGGCGATCG AAATGCGCCG CATTGACGCT
GTCATCGCGG CGGTCGCGGC GATGGCAATC GTCATCCTGC TTTATGATCA GCTTCTGTTC
CGCCCCCTCG TCGTGTTTGC TGGCAAGTTT CGCGTTGAGC TTTCCGCGAG CCAGACGAAG
GAGAGTTCCT GGGTCGCCGA TCTGTTCAAT CGTACGCGTT GGTTGCGTGC TCTCATGAGC
ATGCCGGTTC AGACGCTCTC GAGCATTGCG CTCTGGCGTC TTGAACTCCC GTTCTGGCGG
GCGCAGGCCA TAGACAAACA GGCCCATTCG AGCCGGGTTC TCGATCTCTT GTGGATCACC
CTCATTGCTT TTCTCTCTCT GTGGGCCTTG CGCTTCGTCA TTGTCTTCGT CGGCCAGACT
CTGACGTTCG CGGATATTCA AGAGAGTCTC ATTCTCACCT TTTTCACCAT GCTTCGCGTG
GTGCTTCTCA TGGCTCTGGC GACATTGGTC TGGGTGCCGA TCGGCGTATT CATCGGCTTG
CGTCCGGCAC TCGCGGAAAA GATCCAGCCG CTGGCACAAT TCCTGGCGGC CTTTCCGGCC
AATGTGGTCT TCCCCATCGT CGTCGTCGTG ATTGTGCGGT TCGGCCTTAA CCCCGATATC
TGGTTGAGCT TCCTGATTAT TTTCGGCACG CAATGGTATA TTCTTTTCAA TGTCATTGCG
GGCACCATGG CTTTTCCGAA CGATCTCAAG GAAGCCGCCT CCTCCTTCGG CATCAAGGGG
TGGAACTGGT GGACGTCCGT CATCCTGCCC GGCATTTTTC CCTTTTATGT CACGGGTGCT
CTGACGGCCT CTGGCGGCTC ATGGAATGCC GCGATCGTCG CTGAATCCGT GAAATGGGGC
GATGTCAGCA TCGAAGCGCA TGGGATCGGC GCCTATATTG CCGATGCAAC CGCCAAGGGC
GATTATCCGC GCATCGTGCT GGGCGTCACC GTCATGTCGA TCGTCGTCAT ATTGTTTAAT
CGGCTCGTGT GGCGGCCCTT GTTCGGCCTC GCGGAGCGGC GGCTCAGATT GGATTAA
|
|---|
| Protein sequence | MLARFVSLAF LDRKSLPNPY DFAAFILLLA AFVAVAYGSS GLTLPLSAPE ATHISLDYGA
LPYYALRTTL RMFAAIAASL VFTFTYATLA AKSQRAALVL IPLLDILQSV PILGFLSFTV
TFFLHLFPGS TLGVECAAVF AIFTSQAWNM AFSFYQSLRS LPRDLVEVAN GFHLSPWQKF
WQLETPYAMP ALIWNTMMSM SGGWFFVVAS EAISVGDTTV KLPGIGSYLA QAIEMRRIDA
VIAAVAAMAI VILLYDQLLF RPLVVFAGKF RVELSASQTK ESSWVADLFN RTRWLRALMS
MPVQTLSSIA LWRLELPFWR AQAIDKQAHS SRVLDLLWIT LIAFLSLWAL RFVIVFVGQT
LTFADIQESL ILTFFTMLRV VLLMALATLV WVPIGVFIGL RPALAEKIQP LAQFLAAFPA
NVVFPIVVVV IVRFGLNPDI WLSFLIIFGT QWYILFNVIA GTMAFPNDLK EAASSFGIKG
WNWWTSVILP GIFPFYVTGA LTASGGSWNA AIVAESVKWG DVSIEAHGIG AYIADATAKG
DYPRIVLGVT VMSIVVILFN RLVWRPLFGL AERRLRLD
|
|---|
| |