Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1615 |
Symbol | |
ID | 6200906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1823425 |
End bp | 1824432 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641705605 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001832735 |
Protein GI | 182678589 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.246289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGATGA CCCTTTCGCG TTCCTCATCC CTTCTTGCGG CATGCACCGC GCTTCTCGGC CTCGGTCTTG CCGGTTGTGG CGGACGTGTG ACGGCAATCG ATCCTTATCC GCATGCCAGC GATTATGAGA TTTCCGGGAT CGACGTGTCC AAATATCAGG GCGAAATCGA TTGGCGGGCG GTTCAAGCGA GCGGTGTGCG CTTCGCCTGG ATCAAGGCGA CTGAAGGTGG CGATCATCTC GACGAGAAAT TCTTCCAGAA CTGGATGGCT TCAAAAGCGG CCGGTGTGCC TCGGGGCGCC TATCATTTCG CCTATTGGTG CCGCCCGGGC CACGAGCAGG CCGCCTGGTT CCTGAAAAAT GTTCCCTATG ATCCAGACGC ATTGCCGCCC GTGCTCGACG TCGAATGGAA CGGCAATTCC AGGACCTGCC CAAAGAAGAT CCCGCGTGAG GTCGCACTCG CCCAGATGCA TATGATCCTG ACCGCCATGG AACGCGCCTA TGGCAAGCGG CCGGTCATCT ATACATCCGT CGATTTCCAC CGCGACGTGA TGCAGAATGA ATTCAACGAT TATCCGATCT GGGTGCGCAG CGTAAAATAT TACCCGACGG TCAAATATGG CAACCGCCGT TGGCATTTCT GGCAACATAC GGCGGAAGGT CATGTTCCCG GAATTCGCGG CTTCGTCGAT CGCAATGCCT TCAACGGCAA TGCGCGGGAA TGGCAAGCCT GGCTCCAACC CTCGGGCAGG CGGGAAGAAA AACCGGCGCC AGCACCTGTG ACGACAACCG CTTCCATTCC GGCACCTCCG GCCCCTGCGC AGAGCAGCCC CCAAGCGGCG GCTCTGGTTC CTGCGTCAAC ACCCGTTTCC ACACCTCAGA CGAACCTAGC GCCCACGATC AACACGGCAA GCACCAGCTC TCCTTTGCTT CCCGCAGCCG CCATTCCCAC TGCGACAGGA GCGCCCCAGC CCGAGACCGC GCGCTCGGTT GCCATGAGCC AACCTTAA
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Protein sequence | MSMTLSRSSS LLAACTALLG LGLAGCGGRV TAIDPYPHAS DYEISGIDVS KYQGEIDWRA VQASGVRFAW IKATEGGDHL DEKFFQNWMA SKAAGVPRGA YHFAYWCRPG HEQAAWFLKN VPYDPDALPP VLDVEWNGNS RTCPKKIPRE VALAQMHMIL TAMERAYGKR PVIYTSVDFH RDVMQNEFND YPIWVRSVKY YPTVKYGNRR WHFWQHTAEG HVPGIRGFVD RNAFNGNARE WQAWLQPSGR REEKPAPAPV TTTASIPAPP APAQSSPQAA ALVPASTPVS TPQTNLAPTI NTASTSSPLL PAAAIPTATG APQPETARSV AMSQP
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