| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1601 |
|---|
| Symbol | |
|---|
| ID | 6199465 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1806214 |
|---|
| End bp | 1807389 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641705592 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001832722 |
|---|
| Protein GI | 182678576 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4597] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.558305 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTGT CCGATCAATC CGCGACCGAC CGCGCGACGC TCCTCGCCGT CTGGCGCGAT
CCACGTAAAC GCGGTTTCAT CGTACAGGCT CTTTTCGTGC TCGCGCTCTG CCTCGTGCTC
GTCGGCATGT TCACGACGCT CCACGCCAAT ATGGTGGCGC GCGGCATACC GACGGATTTC
TCTTTCTGGA ACCAGACCGC CGGTTTCGAC ATCAATCAAA CACCCATCGC CTATTCGCCG
CTTTCGACCT ATGGCCGGGC TTTTCTCGTT GGCCTCATCA ATACATTGAT CGTGGCGTCG
ATCGGTCTTG TCTGTACGAC CATCATTGGG GTCATCGTAG GCATCTCGCG CCTGTCCAAA
AACCGGCTCG TCTCTTTCCT GGCCGCGACT TATGTCGAAA CCCTGCGCAA CATCCCGCTG
CTGCTGCAGC TCTTGTTCTG GTACAATGCG ATCCTGAAGC CGCTGCCCGG GCCGCGCCAG
TCACTGCTCT TTCCCTTCGG CACCGTCCTC AACAATCGCG GTCTATTTCT GCCGCTGCCA
TCCTTGCTTC CGGGCGCGGC ATGGGTCGGA GCCGCTTTGG CTCTTGGTTT GGCTGCCTCC
TTCCTTGTGG GACGCGGCAC GGCCCTGAAG CCTGGTTGGC CCAAAACCCT TCTCTGTCTG
GTTCTCGCCT TGGGGCCGGC GATCATTGCC GCCATGCTGG CACCGCCGCT CGCCTTCGAC
AGACCCATTC TGAAAGGGTT CAATTATACG GGCGGCTTCC GGGTCTTGCC GGAACTTGTG
GCTCTGCTCC TCGGCTTGAG CCTTTACACA GCCGCCTTCA TCGCCGAAAT CATTCGGGCG
GGCATTATGG CCGTCCCACG GGGCCAGAGC GAAGCCGCCG AGGCGCTCGG CTTGCCCTCT
GGCCTCACGA TGCGACGGAT CATCCTGCCG CAAGCCCTGC GCGTCGTCAT TCCGCCGCTC
ACCAGCCAAT ATCTCAATCT GATCAAGAAC TCTTCCCTGG CCGTATTCAT CGGCTATCCT
GATCTCGTGC AGGTTTTCGC CGGCACGGTG CTCAATCAGA CGGGCGCTGC CGTGCAGATC
ATCTTCATCA CCATGGCCGT CTATCTTGCT GTGTCGCTGG TGACCTCGTT CGCCATGAAT
CTCATCAATC GCCGCATGGC GCTCGTGGAG CGATAG
|
|---|
| Protein sequence | MSLSDQSATD RATLLAVWRD PRKRGFIVQA LFVLALCLVL VGMFTTLHAN MVARGIPTDF
SFWNQTAGFD INQTPIAYSP LSTYGRAFLV GLINTLIVAS IGLVCTTIIG VIVGISRLSK
NRLVSFLAAT YVETLRNIPL LLQLLFWYNA ILKPLPGPRQ SLLFPFGTVL NNRGLFLPLP
SLLPGAAWVG AALALGLAAS FLVGRGTALK PGWPKTLLCL VLALGPAIIA AMLAPPLAFD
RPILKGFNYT GGFRVLPELV ALLLGLSLYT AAFIAEIIRA GIMAVPRGQS EAAEALGLPS
GLTMRRIILP QALRVVIPPL TSQYLNLIKN SSLAVFIGYP DLVQVFAGTV LNQTGAAVQI
IFITMAVYLA VSLVTSFAMN LINRRMALVE R
|
|---|
| |