| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1586 |
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| Symbol | |
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| ID | 6200344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | - |
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| Start bp | 1786460 |
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| End bp | 1788076 |
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| Gene Length | 1617 bp |
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| Protein Length | 538 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641705577 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001832707 |
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| Protein GI | 182678561 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0294354 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCCAT TGATGGACGT CGACAAAACC AGTGATTTGG CTCTGCCCGT TTCGGGAACG
GATGTAGCGG ACGGCGATCT GACCTTATCC ATTCCGGATG AAGGTTCCGA CCCGCCTCGC
ATAAGTCTAG CCATGATGCA GGCGGCCTCT TCATTGGCTG GGCAATTTTC CCAGGTTTTT
TTGCGCGAGT CGGGGCTTTT TCCTTTTCGG GCGGAAAATG GCGCCATTTG GATCGCCGCC
GCTGATCCAA ACCGACCGGA ACCCATTGAT GCCCTGCGGC TGACGCTTGC CGGTGACATC
GCCATTGCGA CGGCGGCCCG CGAGGATATT GAAACAATTC TCGATCTCGT ATCGACGCGG
GAAACGGAGA CGGAAGCCCA GGCCGGAGAT AGCCAGAGCC CGGATGTGAC CGCCGAGGAT
GCCGAAAGCT TGCGTGATCT CGCAAGCGGC GCCCCCGTCG TGCAGGCTCT CGAACAGATT
TTTGAACGTG CCGTGACCTG GCGCGGGACC GACATTCATA TCGAACCTCT CAAACGCGAG
CTTCGTGTCC GCATCCGCGT GGATGGCATC CTGCGATTGA TGCCCGTTCC TCAAAACGTT
TCCGCTCGCG CGCTCGTCTC GCGGGTGAAA ATCCTAAGCG GCCTGAACAT CGCCGAACAC
CGCTTGCCCC AGGATGGACG CGCCCGCATG CAAGTGCGCG GGCGCGAATT CGACCTCCGC
GTGGCGACCA TGCCGACCAT GGGCGGAGAA GCCGCCATTC TGCGTCTGCT CGAGCGCAAT
TCCACGCTCG TCGCCTTCGG CAAAATCGGC TTCAGTCCAC GCGATGAAGC CGTGTTGCGC
CGGCAACTCG GGCGGCCGCA TGGTCTGCTG ATCGTCACGG GGCCGACGGG AAGCGGCAAG
ACGACCACGC TTGCCGCCAG TATTGCGGAA ATGAATGACA CGAGCCGCAA AATCCTGACG
ATCGAGGATC CGGTCGAATA TGAGCTCCCC GGCGTCAGCC AGTCTCAAGT TCGCTCCGCG
ATCGGTTTGA CCTTCGCCAA CGCCCTGCGC GCGTTCCTGC GTCAGGATCC CGATGTCATC
ATGGTCGGCG AAATCCGCGA TGGCGAAACC GCCAGCATCG CCATGCAAGC GTCTCTGACC
GGCCATCTTG TGCTCAGTAC CCTGCATACG AATAGCGCGG CGGCGGCGCT CAATCGCCTC
ACCGATCTGG GGATCGAACC CTTTCTCGTC GCGTCCACTT TGACCACTGT GGTGGCCCAG
CGTCTCGCAC GCAATCTTTG TCCCGATTGC AAGAAACCGG CGGCCGTGAC ACAGCAAGAT
CTCGAGGAGG ACCCCCGTCT CACGGCCTTC GGCTTCGAGA TCGGTACCAT CCTGCACCAC
GCGGTGGGTT GCGAGCGTTG TGCTCATACC GGCTATCGCG GGCGTGGCGC CTTATTCGAG
GTGCTGGAAA TCACCGACGA GATTCGGCGG CTGATCTTGA ATGGAGCGGA TGAGGGTATC
ATCGTTCAGA CGGCCCGGAC GCAGGGCATG CAGACCATGC TGGACGACGG TCTCGCCCGC
TGCCGCCTGG GTCAAACGAC GATCGACGAA GTTTTCCGCG TCGTCGCGCA ATCCTGA
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| Protein sequence | MKPLMDVDKT SDLALPVSGT DVADGDLTLS IPDEGSDPPR ISLAMMQAAS SLAGQFSQVF
LRESGLFPFR AENGAIWIAA ADPNRPEPID ALRLTLAGDI AIATAAREDI ETILDLVSTR
ETETEAQAGD SQSPDVTAED AESLRDLASG APVVQALEQI FERAVTWRGT DIHIEPLKRE
LRVRIRVDGI LRLMPVPQNV SARALVSRVK ILSGLNIAEH RLPQDGRARM QVRGREFDLR
VATMPTMGGE AAILRLLERN STLVAFGKIG FSPRDEAVLR RQLGRPHGLL IVTGPTGSGK
TTTLAASIAE MNDTSRKILT IEDPVEYELP GVSQSQVRSA IGLTFANALR AFLRQDPDVI
MVGEIRDGET ASIAMQASLT GHLVLSTLHT NSAAAALNRL TDLGIEPFLV ASTLTTVVAQ
RLARNLCPDC KKPAAVTQQD LEEDPRLTAF GFEIGTILHH AVGCERCAHT GYRGRGALFE
VLEITDEIRR LILNGADEGI IVQTARTQGM QTMLDDGLAR CRLGQTTIDE VFRVVAQS
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