| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1553 |
|---|
| Symbol | |
|---|
| ID | 6200203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1754022 |
|---|
| End bp | 1754783 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641705543 |
|---|
| Product | silent information regulator protein Sir2 |
|---|
| Protein accession | YP_001832674 |
|---|
| Protein GI | 182678528 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.469137 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.708091 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATCC TGAATCAGAT TGGCGAAGCG CGGACGGCCT TGCTCGAATT GATCGAACAG
TCCGACAATA TCGTCGCCTT TACCGGCGCC GGTATTTCAA CCGAATGCGG CGTCCCGGAT
TTTCGTTCCA AAGATTCTCC GTGGATGCGT TATAAGCCGA TCGAATTCAA TCTCTTCCTG
TCCGATGTCT TGATGCGTGA GGAAGCCTGG CGGCGGAAAT TCGCCCTCGA CGATATCTAT
TCCATGGCGC AGCCCGGGCG CGGCCATTAT GCCCTCGCCA ATCTGGTCCA ACAGGGCAAA
ATCTCAGCCA TCATCACGCA GAATATCGAT AATCTCCACC AGATGTCTGG CGTCGACGAC
GAGCACATCA TCGAATTGCA CGGCAATGGC ACTTATGCCA CCTGCCTGTC CTGCGGGCTT
CGCCATGAAC TGGCCAACGT GCGGCACGAT TTTGAGACGA CCGGGGCGGC GCCGGAGTGC
AGGTCCTGTG GCGGTCCGGT CAAATCCGCG ACCATTTCCT TCGGCCAATC CATGCCTGAG
GAGGCCATGC AGCGCGCCCA TGACGTGACT CGGGCCTGTG ATTTGTTTCT GGCCATCGGT
TCCTCACTCG TCGTCTACCC GGCCGCCGCC TTTCCACTCC TCGCGGCGCA AAACAACGCG
CGTCTCGTGA TCTTGAATGG GGAAGCGACA CCGCTCGATT CCGAGGCGGA TCTGATCCTG
CGCGGCGATA TTGGTGATAT TCTCGAACCC TTCTCGAGCT AA
|
|---|
| Protein sequence | MVILNQIGEA RTALLELIEQ SDNIVAFTGA GISTECGVPD FRSKDSPWMR YKPIEFNLFL
SDVLMREEAW RRKFALDDIY SMAQPGRGHY ALANLVQQGK ISAIITQNID NLHQMSGVDD
EHIIELHGNG TYATCLSCGL RHELANVRHD FETTGAAPEC RSCGGPVKSA TISFGQSMPE
EAMQRAHDVT RACDLFLAIG SSLVVYPAAA FPLLAAQNNA RLVILNGEAT PLDSEADLIL
RGDIGDILEP FSS
|
|---|
| |