Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1528 |
Symbol | |
ID | 6199829 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1729777 |
End bp | 1730451 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641705517 |
Product | cold-shock DNA-binding domain-containing protein |
Protein accession | YP_001832650 |
Protein GI | 182678504 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.689513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.786377 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG GTAGAGATTT CCGGGGTCCC AAGAAACGTG GTTTTGATGA TGATGGGCCC TCGCCCTATG ATTCGCCGCG CCCCAGCCGT ACACCACGTC CTTCCTTCGG AGCCCCATCG GGAGGCGGCT TCGGCGGCGG CGCTCCCGAC CTGGCGCCAT CACCCTCGAG CCCACCCGTC GATGCTATCG TCAAATGGTT CAAGGGTGAC AAGGGCTTCG GCTTCGTTGA GTTGAGCAAT GGCGCCGGTG ACGCCTTTCT CCATATCGGC GCGCTTCAGG CCGCCGGCTA TGAGAGCGTG CCTCCGGGCG CCAAACTGAA GGTCAATGTC GGCAATGGCA TGAAGGGCGC TCAGGTGACC CGTGTGCTCG AAGTCGACAC GGCCGGCGCC GCCGAGCGCG CGCCGCAGCG TCCTTCTTTC GGCGATTCGC CGCGGCCGCC GCGCCGCGCC CCCGATCCTT CGAGCGCCGT GTCTGTCACC GGTACGGTCA AATGGTTCGA CGACAACAAG GGCTTTGGCT TCGTCCAGTC GAACGATGGC GGCAAGGACG TCTTCGTCCA TATTTCCATC CTCGGCTCCT CGGGGGTGCA ACACCTCGCC GAGGGCCAGG CCGTGACCAT GCGTGTCGTC GATACGCCCA AGGGACGTGA AGCCCTGTCG ATCTCCCTCG ACTAA
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Protein sequence | MSKGRDFRGP KKRGFDDDGP SPYDSPRPSR TPRPSFGAPS GGGFGGGAPD LAPSPSSPPV DAIVKWFKGD KGFGFVELSN GAGDAFLHIG ALQAAGYESV PPGAKLKVNV GNGMKGAQVT RVLEVDTAGA AERAPQRPSF GDSPRPPRRA PDPSSAVSVT GTVKWFDDNK GFGFVQSNDG GKDVFVHISI LGSSGVQHLA EGQAVTMRVV DTPKGREALS ISLD
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