| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1517 |
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| Symbol | |
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| ID | 6199871 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010581 |
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| Strand | + |
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| Start bp | 1716935 |
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| End bp | 1717987 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641705506 |
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| Product | NifR3 family TIM-barrel protein |
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| Protein accession | YP_001832639 |
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| Protein GI | 182678493 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0632964 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTTTG CTGATCCTTT AGGCATACAG CGAACAGCAG CGGGCGAGGA GGCCGGCCCT
GTGCGCGCTG GCGCTTTGCG CATCGGTCCC TTGGAGGTTG CGGGCCGAGC CTTTCTCGCG
CCTATGGCTG GCATTACCGA TCTTGGCATG CGTCGCTTGG CGCAACAGTT CGGCGCGGGG
CTCGTCGTGT CCGAAATGGT CTCGAGCGAT GAATATGCGA AGGGCGACGC CGCCAACAGG
CTCAAAGCGG GCGGGCAGGG GATCGAGCAA TCCGTAGTGC AGATTGCTGG TTGCGATCCC
GTCGCCATGG GTGAGGCCGC GCGTCAAGCT GAAGGCTCCG GCGCGGCCAT GATCGATATC
AATATGGGCT GCCCCGCGCG GAAAGTGATC GGCGGCTATG CGGGCTCCCA TCTCATGCGT
GATCTTGATC GCGCCGTGGC CCTGATCCGC GCCGTTATCG GCGCCGTCCG CGTGCCGGTG
AGCGTAAAAA TGCGTCTTGG CTGGGATGAT CAACAAAGAA ACGCCGCCGA CCTTGGCCGT
CTCGCCGAGG CCGAAGGCGT GGCCATGCTG AGCGTGCACG GCCGCACCCG CTGCCAGTTC
TATCGTGGCA AGGCGGATTG GGCCGCCGTG CGCGCGGTGA AAGAGGCGGT GACAATACCG
GTCGTCGTCA ATGGTGATTG CACCGGTCCC GCCGTCGCCT CGGCCATGCT CGCGCAATCG
GGAGCCGATG CGGTCATGAT CGGCCGTGCG GCCGTGGGGA AACCCTGGCT TGTGGGCGAT
ATCGCTTATT ATCTTGAGAC GGGTGAGGTT CGTCCCGAGC CCTCGGCTCA GATTCAGGCC
GAGGCCACGC TCGACCATTA CGAGACCCTG CTTTCTCTTT ATGGCACGGA GCATGGCGTG
CGGCATGCGC GCAAGCATCT TGCGGGCTAT GCGGTTCATC GTCACGCGCC GTCCGATCTC
CGGCGCCGCC TCGTCACCAG TGAACATCCT GCCGAGGTTA AATCCATTCT CCTGTCGCTT
GCACGCGACA CCTTTTGGGC GGAGGCCGCA TGA
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| Protein sequence | MNFADPLGIQ RTAAGEEAGP VRAGALRIGP LEVAGRAFLA PMAGITDLGM RRLAQQFGAG
LVVSEMVSSD EYAKGDAANR LKAGGQGIEQ SVVQIAGCDP VAMGEAARQA EGSGAAMIDI
NMGCPARKVI GGYAGSHLMR DLDRAVALIR AVIGAVRVPV SVKMRLGWDD QQRNAADLGR
LAEAEGVAML SVHGRTRCQF YRGKADWAAV RAVKEAVTIP VVVNGDCTGP AVASAMLAQS
GADAVMIGRA AVGKPWLVGD IAYYLETGEV RPEPSAQIQA EATLDHYETL LSLYGTEHGV
RHARKHLAGY AVHRHAPSDL RRRLVTSEHP AEVKSILLSL ARDTFWAEAA
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