| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1485 |
|---|
| Symbol | |
|---|
| ID | 6201186 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1688964 |
|---|
| End bp | 1689908 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641705474 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001832607 |
|---|
| Protein GI | 182678461 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.397513 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATGCA TTATTGCTAT AATGAACATA ACACAAAAGC ATCTTCCGGG AATCGACCTT
GATCTGCTGC CGGTGCTCGA CGCGCTGCTG CGGCGGCGCA ATGTCACCCA TGCCGGACGG
GAGGTTGGGC TGAGCCAGCC GGCGATGAGT CGCGCGCTCG GCCGGCTGCG GCATCTGTTC
GATGATCCGC TGCTGGTGCG CCAGGCGGGC GGCTTCGCGC TGACGCCCAA GGCGCAGCGG
CTGGCGCCAC AGGTCGCTAT CGCGCTCGAA CAGGTGGGCG CGCTGTTCCG CGATGCGCCG
TTTGATCCCG CGGCGGAGCA GCGCACGATC CGCATCGTCG CGGCCGATGC CCAAACGCTG
CTGCTGTTGC CCGAGGTCAT GCGTCGGGTC TCCCGCGAGG CGCCGGGGAT ACGCGTCGCC
GTGGAGGGCT ATAGTCCCGA AACGATCACC CATATGCAGC AGGGACGGAT CGATTTCGCC
TTCGCGCTGG CGTCCTCTCC GCTGCCACCG GGAGCGGAGA GCATGACACT GGGCACCGAC
CGGCTGATGC TGGTGACGCG GCGCGATCAT CCGCTGGCGG CAGGGCCGGT ATCGGCGGAA
GACTATGCGC GCTTTCCCCA CGTGGCGATC ACCATCTTTG GCGATGGCCA GTCGGAGATC
GATGCGGCGC TGGCGGCGCG GCGGCTGTCG CGCACGATCG CGCTGACTAC GCCGTATTTC
GCCGCCGCTT TGGCTGTTGT GGCGGCGACG GATTACGTGA CCACGCTATC GGAGGCGCTG
GCCCGCCGTT TCAGCGACAC GTTCAGCCTG GTGATCAGGC CATCGCCGCT GATCGCAGAA
CCCCATTCCC TCACATTGGT TTGGGACCGT ATCCGCTCCA AAGATCCGGC TCTTTTCTGG
TTCCGTGAAT TGGTGCGCGA CGTGGCGGTA ACGATCTACG GATAA
|
|---|
| Protein sequence | MKCIIAIMNI TQKHLPGIDL DLLPVLDALL RRRNVTHAGR EVGLSQPAMS RALGRLRHLF
DDPLLVRQAG GFALTPKAQR LAPQVAIALE QVGALFRDAP FDPAAEQRTI RIVAADAQTL
LLLPEVMRRV SREAPGIRVA VEGYSPETIT HMQQGRIDFA FALASSPLPP GAESMTLGTD
RLMLVTRRDH PLAAGPVSAE DYARFPHVAI TIFGDGQSEI DAALAARRLS RTIALTTPYF
AAALAVVAAT DYVTTLSEAL ARRFSDTFSL VIRPSPLIAE PHSLTLVWDR IRSKDPALFW
FRELVRDVAV TIYG
|
|---|
| |