Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bind_1478 |
Symbol | |
ID | 6198988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
Kingdom | Bacteria |
Replicon accession | NC_010581 |
Strand | - |
Start bp | 1683548 |
End bp | 1684114 |
Gene Length | 567 bp |
Protein Length | 188 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641705469 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001832602 |
Protein GI | 182678456 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.182244 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAAGAC CCAAGACCTT CGATGTCGAT GCCGCGCTCG ATGCGGCGAT TGGTATATTC CGCGAGCATG GCTTCGAAGG CACCTCGGCG CAGATGCTGG TCGATGCGAT GGGAATTGGA CGGCAGAGCC TCTACGATAC CTTCGGCGAC AAGTGGCAGC TCTACCAACA GGCTTTGCGG CGCTATGTAA TCACCGAGGT GCAGGCGCAT CGCGCCGCGC TCACTTCGGG GCTGCGGGCG ATCGATGGCA TCCGCGCGAT AGTGGAGCGC GTGGTGCGGG AGGCGGCAAT ACCGTGCCTG GGCGTCGGCT CAATCGCAGA GTTCGGTTGC TCGCGGCCCG AACTTGCCGA GATCAACGCA GCAGCCAACC GCGCTCTCCG CACTGCCATG ATCGAGCGGC TTCGCGCTGC GCAAGCCGAG GGCGACATCG CCGAAGCGCT CGACCTTGAC CCGGTGGCGA CCTTCCTCAT CGCGAGCTTT GCCGGAATCC GCATCGCCGG ACGCAGCGGC GCGAGGCCGA AAGAACTCGG CAGCCTTGGC GAGATGGTCT TACGGGCGCT GCGCTGA
|
Protein sequence | MTRPKTFDVD AALDAAIGIF REHGFEGTSA QMLVDAMGIG RQSLYDTFGD KWQLYQQALR RYVITEVQAH RAALTSGLRA IDGIRAIVER VVREAAIPCL GVGSIAEFGC SRPELAEINA AANRALRTAM IERLRAAQAE GDIAEALDLD PVATFLIASF AGIRIAGRSG ARPKELGSLG EMVLRALR
|
| |