| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1456 |
|---|
| Symbol | |
|---|
| ID | 6200104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1664272 |
|---|
| End bp | 1665018 |
|---|
| Gene Length | 747 bp |
|---|
| Protein Length | 248 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 641705450 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_001832583 |
|---|
| Protein GI | 182678437 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.640452 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAC TGCATGGCAA GAAAGCCTTG GTCACGGGCG CTTCCCGTGG CATGGGCCGC
GCGACGGCAC TCGCTCTGGC AGCTGCCGGC GCGGAGGTGC TGGTCCACTA CAGTTTCAAT
GAGAAGGCAG CAAACACCGT CGTCGAGGAG ATCATAGGTA ACGGCGGAAA AGCCCATGCC
GTTGCAGCTG ACTTGCGCGA CATTCAAGGG ACCTTCGACC TATCCGAGCG CGTCCGTGAG
ATTACTTCCG GAAAACTCGA CATTCTCGTC GCCAATGCGG GTATCGCACG TCCAGCCCGT
CTCGAAGATA CGACAGTTGC AGACTTCGAC GACATGTTTG CCGTCAATGT CAAAGCCCCT
TTCTTTCTGG TGCAACAGTT GTCGCCTATC ATGGGCGCTG GCAGCAGCAT TATTCTCACC
TCGTCGTTGG CGACCCGCAC GACCGTCGGC GACCTCTCAG CCTATGCCGC CTCGAAGGGA
GCGATCTCGA CATTGGTGAC CCATTTCGCA GCAGAGCTGG GTTCGCGTGG TATCCGCGTC
AACGCGATCG CACCGGGTGT CGTCGCCACC GACATGTCGA GTTTCGTCGA AACGACCGAG
GGTCAGGAAT TCACCCTGGG TATCCAGGCG ATCAAGCGCG TGGCGACGCC GGAGGATATT
GCCGGGGTGA TCGTGTTCCT TGCAGGTGAT GATGCCCGCT GGGTTACGGG GGACGTCATT
CGGGCCGATG GCGGTTCCAA GCTGTGA
|
|---|
| Protein sequence | MTQLHGKKAL VTGASRGMGR ATALALAAAG AEVLVHYSFN EKAANTVVEE IIGNGGKAHA
VAADLRDIQG TFDLSERVRE ITSGKLDILV ANAGIARPAR LEDTTVADFD DMFAVNVKAP
FFLVQQLSPI MGAGSSIILT SSLATRTTVG DLSAYAASKG AISTLVTHFA AELGSRGIRV
NAIAPGVVAT DMSSFVETTE GQEFTLGIQA IKRVATPEDI AGVIVFLAGD DARWVTGDVI
RADGGSKL
|
|---|
| |