Gene Bind_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBind_1390 
Symbol 
ID6198797 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeijerinckia indica subsp. indica ATCC 9039 
KingdomBacteria 
Replicon accessionNC_010581 
Strand
Start bp1595199 
End bp1595747 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content59% 
IMG OID641705386 
Productinvasion associated locus B family protein 
Protein accessionYP_001832519 
Protein GI182678373 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.931817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.600355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCAAAA TTTCTGTTCC GATTGCCCTT GCTCTCTTGT CGCTGACGAC AACAGTTTGG 
ACGACAGCGA CTTGTCTTGC GGAGAAAGCG AAACCGGCGA GCCCCGACGC GCAAATGACT
GTAACCAATT ATGGGGATTG GGCCTTGCGC TGCCAAGCGG GAGGCAACAA GGATGCCAGG
AATTGTGAAG TCGCCCTGAC CATCCAGGCG AAGGATCAGA CCGCGCCGAT CGCCAAGATC
GCACTGGGCC GGCCAACGCT CGAGGCGCCG CTCCAGGCGA TCGTTCTCCT GCCGACCAAT
GTTTCGTTCC CCAGCACGGT CAAGCTTTTC TCCAGCGACA AGGACCCCTG GGGTCTCGAT
TTTACTTGGA GGCGTTGCGT GCAAGGCGGG TGCTTCGCGG AATCCGTGCC GAGCGATGAC
GATCTGAAAC ATTGGCGCGA AGCGAAGGGT GACGGCCGTC TTCTCTTCAA GGACGCAAGC
GGGCATGATC TCACGATCCC CGTGTCGTTC AACGGTCTCG GACAGGCTCT CGACGCCCTC
TCGAAATGA
 
Protein sequence
MFKISVPIAL ALLSLTTTVW TTATCLAEKA KPASPDAQMT VTNYGDWALR CQAGGNKDAR 
NCEVALTIQA KDQTAPIAKI ALGRPTLEAP LQAIVLLPTN VSFPSTVKLF SSDKDPWGLD
FTWRRCVQGG CFAESVPSDD DLKHWREAKG DGRLLFKDAS GHDLTIPVSF NGLGQALDAL
SK