| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1371 |
|---|
| Symbol | rpsE |
|---|
| ID | 6199836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | + |
|---|
| Start bp | 1577304 |
|---|
| End bp | 1577873 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641705367 |
|---|
| Product | 30S ribosomal protein S5 |
|---|
| Protein accession | YP_001832500 |
|---|
| Protein GI | 182678354 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0098] Ribosomal protein S5 |
|---|
| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.868887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.133817 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGTG AAGGTGAAGG CGGCGGTCGT GGTGGCCGCG AAGAACGCGA TAGCGAATTC
GTGGACCGTT TGGTCCATAT CAATCGCGTC GCCAAAGTGG TGAAAGGCGG CCGGCGGTTT
GGCTTTGCCG CTCTGGTCGT GGTCGGCGAC CAGAAGGGTC GAGTCGGCTA TGGCCATGGC
AAGGCCCGTG AAGTGCCGGA AGCTATTCGC AAAGCGACGG AATCGGCTAA GCGGGCCTTG
ATTCGCGTGC CCTTGCGCGA GGGGCGGACG CTGCATCATG ATGTGAATGG TCGCCACGGA
GCTGGGCGTG TCGTCCTGCG CGCTGCGCCC GCCGGAACCG GGATCATCGC TGGCGGCCCG
ATGCGCGCCG TTTTCGAAAC ACTCGGCATG CATGACGTGG TTGCGAAGTC GCAGGGGTCT
TCGAACCCTT ACAATATGAT TCGCGCAACG TTCGACGCTT TGCAGCGCGA GGATTCACCG
CGCGCCGTCG CTGCCCGCCG TAGCCTCAAG GTTTCGGTTC TCCAAGGCCG GCGCCTGGGC
GGTGACACCG AAACCGCTGC GGAAGGTTGA
|
|---|
| Protein sequence | MAREGEGGGR GGREERDSEF VDRLVHINRV AKVVKGGRRF GFAALVVVGD QKGRVGYGHG
KAREVPEAIR KATESAKRAL IRVPLREGRT LHHDVNGRHG AGRVVLRAAP AGTGIIAGGP
MRAVFETLGM HDVVAKSQGS SNPYNMIRAT FDALQREDSP RAVAARRSLK VSVLQGRRLG
GDTETAAEG
|
|---|
| |