| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bind_1310 |
|---|
| Symbol | |
|---|
| ID | 6199979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beijerinckia indica subsp. indica ATCC 9039 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010581 |
|---|
| Strand | - |
|---|
| Start bp | 1518055 |
|---|
| End bp | 1518777 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641705304 |
|---|
| Product | haloacid dehalogenase, type II |
|---|
| Protein accession | YP_001832439 |
|---|
| Protein GI | 182678293 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
|---|
| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTGA AAACGATCAA GGCCATGCTT TTCGACGTGT TCGGCACCGT CGTGGATTGG
CGCTCCGGCG TTGCCCGCGA GGCTGGCGCT TTTTTAAGCC GGCATGGACG CCAGGATATC
GATCCCCTTG CCTTCGCTGA TGCTTGGCGT GCGCTCTATG TCCCTGCCAT GGCCAAAGTG
CGAGACGGCA CGCGACCTTT CACCCCGCTC GATAGGCTCC ATCGGGAAAA TCTGGAGGCT
GTTTTGCCGC ATTTTGGCTT CGATCCCGCC GCTCTTCCGG TTTCTGAGCT GGATGACCTC
AATCTGGCAT GGCATCGTCT GGATCCCTGG CCCGACAGCA TCAGCGGGCT TTCCCGGTTG
AAGAAAGGAC TGATCATCGC GCCCTTGTCC AATGGCAATG TCCGATTGAT GGTGGATATG
GCCAAACGCG CCGGCCTGCC TTGGGACGCT ATTCTCGGCG CCGAGGTGGC ACAGGCCTAT
AAGCCACAAC CGCAAGCCTA TTTGCGCACG GCGGAAATTC TTATGCTGAA ACCGCAGGAA
GTCTGCATGG TTGCCGCGCA TAATAATGAC CTCGCGGCGG CAAGGGCTTG CGGTTTACAA
ACAGCTTTCG TGGCCCGCGT GAAAGAACAT GGTCCAGGTC AAACCACGGA TCTGACCCCT
GAACAAGACT GGGATGTGAT CGCCGAAGAT TTCAATGCCC TGGCGGCATG TCTCGAACTC
TAA
|
|---|
| Protein sequence | MSLKTIKAML FDVFGTVVDW RSGVAREAGA FLSRHGRQDI DPLAFADAWR ALYVPAMAKV
RDGTRPFTPL DRLHRENLEA VLPHFGFDPA ALPVSELDDL NLAWHRLDPW PDSISGLSRL
KKGLIIAPLS NGNVRLMVDM AKRAGLPWDA ILGAEVAQAY KPQPQAYLRT AEILMLKPQE
VCMVAAHNND LAAARACGLQ TAFVARVKEH GPGQTTDLTP EQDWDVIAED FNALAACLEL
|
|---|
| |